Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 AC116050.2-201ENST00000612102 1779 ntBASIC22.26■■□□□ 1.15
HLA-DRAP01903 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DRAP01903 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.25■■□□□ 1.15
HLA-DRAP01903 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DRAP01903 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
HLA-DRAP01903 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DRAP01903 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.25■■□□□ 1.15
HLA-DRAP01903 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
HLA-DRAP01903 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.25■■□□□ 1.15
HLA-DRAP01903 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
HLA-DRAP01903 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DRAP01903 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DRAP01903 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DRAP01903 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DRAP01903 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DRAP01903 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DRAP01903 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.24■■□□□ 1.15
HLA-DRAP01903 AC006128.1-201ENST00000624704 1661 ntBASIC22.24■■□□□ 1.15
HLA-DRAP01903 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
HLA-DRAP01903 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 AL591742.1-201ENST00000604433 565 ntBASIC22.24■■□□□ 1.15
HLA-DRAP01903 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.24■■□□□ 1.15
HLA-DRAP01903 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.24■■□□□ 1.15
HLA-DRAP01903 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
HLA-DRAP01903 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
HLA-DRAP01903 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
HLA-DRAP01903 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.24■■□□□ 1.15
HLA-DRAP01903 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DRAP01903 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
HLA-DRAP01903 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.23■■□□□ 1.15
HLA-DRAP01903 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.23■■□□□ 1.15
HLA-DRAP01903 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 AC007322.3-201ENST00000426526 701 ntBASIC22.23■■□□□ 1.15
HLA-DRAP01903 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.23■■□□□ 1.15
HLA-DRAP01903 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.23■■□□□ 1.15
HLA-DRAP01903 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.23■■□□□ 1.15
HLA-DRAP01903 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.23■■□□□ 1.15
HLA-DRAP01903 AC073111.5-205ENST00000641717 521 ntBASIC22.23■■□□□ 1.15
HLA-DRAP01903 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.23■■□□□ 1.15
HLA-DRAP01903 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.23■■□□□ 1.15
HLA-DRAP01903 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 AC068338.2-201ENST00000563278 1430 ntBASIC22.23■■□□□ 1.15
HLA-DRAP01903 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DRAP01903 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.22■■□□□ 1.15
HLA-DRAP01903 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
HLA-DRAP01903 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DRAP01903 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DRAP01903 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.22■■□□□ 1.15
HLA-DRAP01903 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DRAP01903 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DRAP01903 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
HLA-DRAP01903 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DRAP01903 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DRAP01903 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DRAP01903 CDCA4P2-201ENST00000441182 718 ntBASIC22.22■■□□□ 1.15
HLA-DRAP01903 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.22■■□□□ 1.15
HLA-DRAP01903 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HLA-DRAP01903 AC231657.2-201ENST00000624556 255 ntBASIC22.22■■□□□ 1.15
HLA-DRAP01903 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.21■■□□□ 1.15
HLA-DRAP01903 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HLA-DRAP01903 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.21■■□□□ 1.15
HLA-DRAP01903 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HLA-DRAP01903 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
HLA-DRAP01903 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HLA-DRAP01903 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.21■■□□□ 1.15
HLA-DRAP01903 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HLA-DRAP01903 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.21■■□□□ 1.15
HLA-DRAP01903 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
HLA-DRAP01903 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HLA-DRAP01903 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
HLA-DRAP01903 AC007322.1-201ENST00000426983 750 ntBASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms