Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SCAF4O95104 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.85■□□□□ 0.29
SCAF4O95104 AC010141.3-201ENST00000456659 717 ntBASIC16.85■□□□□ 0.29
SCAF4O95104 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.85■□□□□ 0.29
SCAF4O95104 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCAF4O95104 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCAF4O95104 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCAF4O95104 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCAF4O95104 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCAF4O95104 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCAF4O95104 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SCAF4O95104 SYT6-210ENST00000641643 1587 ntBASIC16.85■□□□□ 0.29
SCAF4O95104 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCAF4O95104 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SCAF4O95104 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SCAF4O95104 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.84■□□□□ 0.29
SCAF4O95104 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 AC006455.2-201ENST00000429931 906 ntBASIC16.84■□□□□ 0.29
SCAF4O95104 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.84■□□□□ 0.29
SCAF4O95104 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.84■□□□□ 0.29
SCAF4O95104 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.84■□□□□ 0.29
SCAF4O95104 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.84■□□□□ 0.29
SCAF4O95104 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SCAF4O95104 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SCAF4O95104 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.84■□□□□ 0.29
SCAF4O95104 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SCAF4O95104 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SCAF4O95104 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAF4O95104 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCAF4O95104 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAF4O95104 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAF4O95104 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAF4O95104 UNC93B3-201ENST00000308076 687 ntBASIC16.83■□□□□ 0.28
SCAF4O95104 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAF4O95104 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAF4O95104 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAF4O95104 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAF4O95104 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAF4O95104 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAF4O95104 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
SCAF4O95104 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAF4O95104 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAF4O95104 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SCAF4O95104 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAF4O95104 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAF4O95104 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAF4O95104 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
SCAF4O95104 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SCAF4O95104 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SCAF4O95104 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SCAF4O95104 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.82■□□□□ 0.28
SCAF4O95104 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 DUX4L19-201ENST00000557448 1267 ntBASIC16.82■□□□□ 0.28
SCAF4O95104 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SCAF4O95104 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SCAF4O95104 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SCAF4O95104 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 AP005212.1-201ENST00000581547 1997 ntBASIC16.82■□□□□ 0.28
SCAF4O95104 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SCAF4O95104 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SCAF4O95104 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCAF4O95104 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SCAF4O95104 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCAF4O95104 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
SCAF4O95104 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SCAF4O95104 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCAF4O95104 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms