Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC32.51■■■□□ 2.79
PCF11O94913 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCF11O94913 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC32.51■■■□□ 2.79
PCF11O94913 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC32.51■■■□□ 2.79
PCF11O94913 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC32.51■■■□□ 2.79
PCF11O94913 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCF11O94913 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCF11O94913 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCF11O94913 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PCF11O94913 AC092368.3-202ENST00000574180 1591 ntBASIC32.5■■■□□ 2.79
PCF11O94913 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC32.5■■■□□ 2.79
PCF11O94913 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PCF11O94913 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PCF11O94913 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC32.5■■■□□ 2.79
PCF11O94913 UNC93B4-201ENST00000505679 747 ntBASIC32.5■■■□□ 2.79
PCF11O94913 AC069544.1-201ENST00000609399 999 ntBASIC32.5■■■□□ 2.79
PCF11O94913 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC32.5■■■□□ 2.79
PCF11O94913 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PCF11O94913 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PCF11O94913 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC32.5■■■□□ 2.79
PCF11O94913 LSR-203ENST00000360798 1963 ntTSL 2 BASIC32.5■■■□□ 2.79
PCF11O94913 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC32.49■■■□□ 2.79
PCF11O94913 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC32.49■■■□□ 2.79
PCF11O94913 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC32.49■■■□□ 2.79
PCF11O94913 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCF11O94913 AC142381.4-202ENST00000563973 229 ntBASIC32.49■■■□□ 2.79
PCF11O94913 SOX15-203ENST00000570788 1093 ntBASIC32.49■■■□□ 2.79
PCF11O94913 USP36-216ENST00000589424 970 ntTSL 5 BASIC32.49■■■□□ 2.79
PCF11O94913 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC32.49■■■□□ 2.79
PCF11O94913 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
PCF11O94913 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC32.48■■■□□ 2.79
PCF11O94913 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCF11O94913 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCF11O94913 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCF11O94913 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCF11O94913 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCF11O94913 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCF11O94913 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
PCF11O94913 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC32.48■■■□□ 2.79
PCF11O94913 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCF11O94913 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
PCF11O94913 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
PCF11O94913 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC32.47■■■□□ 2.79
PCF11O94913 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
PCF11O94913 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
PCF11O94913 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
PCF11O94913 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCF11O94913 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCF11O94913 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
PCF11O94913 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PCF11O94913 KRT18P68-201ENST00000392293 1000 ntBASIC32.46■■■□□ 2.79
PCF11O94913 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC32.46■■■□□ 2.79
PCF11O94913 AC073912.3-201ENST00000624414 853 ntBASIC32.46■■■□□ 2.79
PCF11O94913 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCF11O94913 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC32.46■■■□□ 2.79
PCF11O94913 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PCF11O94913 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCF11O94913 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
PCF11O94913 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCF11O94913 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCF11O94913 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC32.45■■■□□ 2.79
PCF11O94913 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
PCF11O94913 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
PCF11O94913 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
PCF11O94913 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
PCF11O94913 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
PCF11O94913 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
PCF11O94913 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
PCF11O94913 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
PCF11O94913 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC32.45■■■□□ 2.78
PCF11O94913 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.78
PCF11O94913 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
PCF11O94913 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
PCF11O94913 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
PCF11O94913 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC32.45■■■□□ 2.78
PCF11O94913 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PCF11O94913 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
PCF11O94913 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
PCF11O94913 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
PCF11O94913 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PCF11O94913 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PCF11O94913 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
PCF11O94913 RHOD-202ENST00000532559 538 ntTSL 3 BASIC32.44■■■□□ 2.78
PCF11O94913 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
PCF11O94913 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC32.44■■■□□ 2.78
PCF11O94913 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC32.43■■■□□ 2.78
PCF11O94913 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PCF11O94913 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PCF11O94913 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
PCF11O94913 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC32.43■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms