Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.88■□□□□ 0.93
USP1O94782 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP1O94782 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
USP1O94782 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.88■□□□□ 0.93
USP1O94782 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
USP1O94782 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.88■□□□□ 0.93
USP1O94782 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.88■□□□□ 0.93
USP1O94782 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP1O94782 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP1O94782 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.87■□□□□ 0.93
USP1O94782 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP1O94782 AP005212.1-201ENST00000581547 1997 ntBASIC20.87■□□□□ 0.93
USP1O94782 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP1O94782 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
USP1O94782 GABARAPL3-202ENST00000624044 1851 ntBASIC20.87■□□□□ 0.93
USP1O94782 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP1O94782 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP1O94782 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
USP1O94782 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
USP1O94782 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP1O94782 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
USP1O94782 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
USP1O94782 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.86■□□□□ 0.93
USP1O94782 AC138907.5-202ENST00000569484 235 ntBASIC20.86■□□□□ 0.93
USP1O94782 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 AL391422.3-201ENST00000603791 2761 ntBASIC20.86■□□□□ 0.93
USP1O94782 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.86■□□□□ 0.93
USP1O94782 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.86■□□□□ 0.93
USP1O94782 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP1O94782 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
USP1O94782 AC007225.1-201ENST00000566331 1836 ntBASIC20.85■□□□□ 0.93
USP1O94782 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP1O94782 AC011484.1-201ENST00000377652 1995 ntBASIC20.85■□□□□ 0.93
USP1O94782 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP1O94782 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP1O94782 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.85■□□□□ 0.93
USP1O94782 RARRES2P6-201ENST00000567333 442 ntBASIC20.85■□□□□ 0.93
USP1O94782 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP1O94782 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
USP1O94782 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP1O94782 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP1O94782 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP1O94782 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP1O94782 AC073314.1-201ENST00000568729 2216 ntBASIC20.85■□□□□ 0.93
USP1O94782 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP1O94782 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.84■□□□□ 0.93
USP1O94782 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.84■□□□□ 0.93
USP1O94782 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.84■□□□□ 0.93
USP1O94782 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.84■□□□□ 0.93
USP1O94782 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.84■□□□□ 0.93
USP1O94782 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
USP1O94782 LINC02228-203ENST00000641970 1355 ntBASIC20.84■□□□□ 0.93
USP1O94782 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP1O94782 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
USP1O94782 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP1O94782 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP1O94782 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP1O94782 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP1O94782 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.83■□□□□ 0.93
USP1O94782 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.83■□□□□ 0.93
USP1O94782 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP1O94782 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.83■□□□□ 0.93
USP1O94782 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.83■□□□□ 0.93
USP1O94782 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
USP1O94782 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP1O94782 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP1O94782 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP1O94782 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP1O94782 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms