Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA12O60330 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA12O60330 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA12O60330 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA12O60330 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA12O60330 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGA12O60330 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA12O60330 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA12O60330 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGA12O60330 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PCDHGA12O60330 AC100791.3-201ENST00000617619 330 ntBASIC20.49■□□□□ 0.87
PCDHGA12O60330 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA12O60330 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA12O60330 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA12O60330 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA12O60330 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA12O60330 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA12O60330 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGA12O60330 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA12O60330 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGA12O60330 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGA12O60330 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA12O60330 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA12O60330 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDHGA12O60330 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA12O60330 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGA12O60330 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA12O60330 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA12O60330 FAM21FP-204ENST00000608637 956 ntBASIC20.48■□□□□ 0.87
PCDHGA12O60330 AC073648.6-201ENST00000641589 218 ntBASIC20.48■□□□□ 0.87
PCDHGA12O60330 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA12O60330 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA12O60330 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA12O60330 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGA12O60330 AL596275.1-201ENST00000423464 877 ntBASIC20.47■□□□□ 0.87
PCDHGA12O60330 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGA12O60330 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHGA12O60330 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.47■□□□□ 0.87
PCDHGA12O60330 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.47■□□□□ 0.87
PCDHGA12O60330 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGA12O60330 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHGA12O60330 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA12O60330 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGA12O60330 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PCDHGA12O60330 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 AC139530.1-201ENST00000575312 1977 ntBASIC20.46■□□□□ 0.87
PCDHGA12O60330 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGA12O60330 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGA12O60330 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGA12O60330 UNC93B4-201ENST00000505679 747 ntBASIC20.46■□□□□ 0.87
PCDHGA12O60330 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHGA12O60330 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
PCDHGA12O60330 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGA12O60330 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA12O60330 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA12O60330 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA12O60330 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA12O60330 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA12O60330 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA12O60330 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGA12O60330 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGA12O60330 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms