Protein–RNA interactions for Protein: O60291

MGRN1, E3 ubiquitin-protein ligase MGRN1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1O60291 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MGRN1O60291 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MGRN1O60291 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MGRN1O60291 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MGRN1O60291 KRT125P-201ENST00000546827 989 ntBASIC20.12■□□□□ 0.81
MGRN1O60291 DUX4L4-201ENST00000566884 1269 ntBASIC20.12■□□□□ 0.81
MGRN1O60291 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MGRN1O60291 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.12■□□□□ 0.81
MGRN1O60291 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.12■□□□□ 0.81
MGRN1O60291 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MGRN1O60291 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.12■□□□□ 0.81
MGRN1O60291 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.12■□□□□ 0.81
MGRN1O60291 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.12■□□□□ 0.81
MGRN1O60291 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MGRN1O60291 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MGRN1O60291 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
MGRN1O60291 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.11■□□□□ 0.81
MGRN1O60291 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
MGRN1O60291 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
MGRN1O60291 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MGRN1O60291 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
MGRN1O60291 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
MGRN1O60291 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
MGRN1O60291 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MGRN1O60291 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MGRN1O60291 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.1■□□□□ 0.81
MGRN1O60291 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MGRN1O60291 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.1■□□□□ 0.81
MGRN1O60291 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MGRN1O60291 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.1■□□□□ 0.81
MGRN1O60291 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.1■□□□□ 0.81
MGRN1O60291 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.1■□□□□ 0.81
MGRN1O60291 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
MGRN1O60291 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MGRN1O60291 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MGRN1O60291 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MGRN1O60291 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MGRN1O60291 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MGRN1O60291 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
MGRN1O60291 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
MGRN1O60291 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MGRN1O60291 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MGRN1O60291 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MGRN1O60291 MIR6722-201ENST00000617286 78 ntBASIC20.09■□□□□ 0.81
MGRN1O60291 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.09■□□□□ 0.81
MGRN1O60291 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MGRN1O60291 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MGRN1O60291 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.09■□□□□ 0.81
MGRN1O60291 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MGRN1O60291 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.09■□□□□ 0.81
MGRN1O60291 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MGRN1O60291 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MGRN1O60291 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MGRN1O60291 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.09■□□□□ 0.81
MGRN1O60291 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.09■□□□□ 0.81
MGRN1O60291 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.08■□□□□ 0.81
MGRN1O60291 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MGRN1O60291 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MGRN1O60291 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MGRN1O60291 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
MGRN1O60291 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MGRN1O60291 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MGRN1O60291 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.08■□□□□ 0.81
MGRN1O60291 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
MGRN1O60291 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.08■□□□□ 0.81
MGRN1O60291 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.08■□□□□ 0.81
MGRN1O60291 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MGRN1O60291 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
MGRN1O60291 AC007613.1-201ENST00000572811 2597 ntBASIC20.08■□□□□ 0.8
MGRN1O60291 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MGRN1O60291 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
MGRN1O60291 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MGRN1O60291 AC005332.8-201ENST00000622750 2735 ntBASIC20.08■□□□□ 0.8
MGRN1O60291 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
MGRN1O60291 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
MGRN1O60291 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
MGRN1O60291 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MGRN1O60291 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MGRN1O60291 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.08■□□□□ 0.8
MGRN1O60291 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MGRN1O60291 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
MGRN1O60291 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MGRN1O60291 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MGRN1O60291 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MGRN1O60291 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
MGRN1O60291 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MGRN1O60291 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MGRN1O60291 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MGRN1O60291 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms