Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 MKRN4P-201ENST00000444706 1521 ntBASIC26.42■■□□□ 1.82
ABCC4O15439 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCC4O15439 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
ABCC4O15439 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.42■■□□□ 1.82
ABCC4O15439 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ABCC4O15439 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ABCC4O15439 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ABCC4O15439 RBM17P2-201ENST00000616397 1405 ntBASIC26.41■■□□□ 1.82
ABCC4O15439 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCC4O15439 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCC4O15439 MIR4758-201ENST00000577688 71 ntBASIC26.41■■□□□ 1.82
ABCC4O15439 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.41■■□□□ 1.82
ABCC4O15439 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCC4O15439 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.41■■□□□ 1.82
ABCC4O15439 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.41■■□□□ 1.82
ABCC4O15439 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCC4O15439 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCC4O15439 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ABCC4O15439 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ABCC4O15439 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
ABCC4O15439 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.4■■□□□ 1.82
ABCC4O15439 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ABCC4O15439 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.4■■□□□ 1.82
ABCC4O15439 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ABCC4O15439 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCC4O15439 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCC4O15439 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.4■■□□□ 1.82
ABCC4O15439 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
ABCC4O15439 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
ABCC4O15439 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCC4O15439 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ABCC4O15439 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.4■■□□□ 1.82
ABCC4O15439 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCC4O15439 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.39■■□□□ 1.82
ABCC4O15439 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.39■■□□□ 1.82
ABCC4O15439 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.39■■□□□ 1.82
ABCC4O15439 AC016405.3-201ENST00000607710 860 ntBASIC26.39■■□□□ 1.82
ABCC4O15439 AC243732.1-201ENST00000612648 864 ntBASIC26.39■■□□□ 1.82
ABCC4O15439 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.39■■□□□ 1.82
ABCC4O15439 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ABCC4O15439 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.39■■□□□ 1.81
ABCC4O15439 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ABCC4O15439 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.39■■□□□ 1.81
ABCC4O15439 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC26.38■■□□□ 1.81
ABCC4O15439 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
ABCC4O15439 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.38■■□□□ 1.81
ABCC4O15439 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ABCC4O15439 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.38■■□□□ 1.81
ABCC4O15439 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
ABCC4O15439 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
ABCC4O15439 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
ABCC4O15439 AC008687.6-201ENST00000596318 630 ntBASIC26.38■■□□□ 1.81
ABCC4O15439 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ABCC4O15439 OR10C1-204ENST00000622521 1039 ntBASIC26.38■■□□□ 1.81
ABCC4O15439 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.37■■□□□ 1.81
ABCC4O15439 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.37■■□□□ 1.81
ABCC4O15439 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.37■■□□□ 1.81
ABCC4O15439 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ABCC4O15439 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCC4O15439 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCC4O15439 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCC4O15439 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
ABCC4O15439 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.37■■□□□ 1.81
ABCC4O15439 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ABCC4O15439 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.37■■□□□ 1.81
ABCC4O15439 AC245052.3-201ENST00000450182 901 ntBASIC26.37■■□□□ 1.81
ABCC4O15439 RNA5SP413-201ENST00000516373 109 ntBASIC26.37■■□□□ 1.81
ABCC4O15439 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.37■■□□□ 1.81
ABCC4O15439 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.37■■□□□ 1.81
ABCC4O15439 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ABCC4O15439 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ABCC4O15439 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ABCC4O15439 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCC4O15439 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
ABCC4O15439 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.36■■□□□ 1.81
ABCC4O15439 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ABCC4O15439 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
ABCC4O15439 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ABCC4O15439 POU5F1P3-201ENST00000428824 1078 ntBASIC26.36■■□□□ 1.81
ABCC4O15439 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.36■■□□□ 1.81
ABCC4O15439 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.36■■□□□ 1.81
ABCC4O15439 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.36■■□□□ 1.81
ABCC4O15439 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.35■■□□□ 1.81
ABCC4O15439 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.35■■□□□ 1.81
ABCC4O15439 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.35■■□□□ 1.81
ABCC4O15439 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.35■■□□□ 1.81
ABCC4O15439 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 AC092118.2-201ENST00000613495 667 ntBASIC26.35■■□□□ 1.81
ABCC4O15439 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ABCC4O15439 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ABCC4O15439 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ABCC4O15439 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms