Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC12.29□□□□□ -0.445e-11■■□□□ 12.1
NKRFO15226 NFE2L2-214ENST00000588123 814 ntTSL 510.84□□□□□ -0.675e-11■■□□□ 12.1
NKRFO15226 NFE2L2-213ENST00000586532 942 ntTSL 56.46□□□□□ -1.385e-11■■□□□ 12.1
NKRFO15226 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC9.61□□□□□ -0.871e-8■■□□□ 12.1
NKRFO15226 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.312e-6■■□□□ 12.1
NKRFO15226 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.252e-6■■□□□ 12.1
NKRFO15226 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.192e-6■■□□□ 12.1
NKRFO15226 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.122e-6■■□□□ 12.1
NKRFO15226 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.882e-6■■□□□ 12.1
NKRFO15226 RTKN-205ENST00000464094 1266 ntTSL 1 (best)25.78■■□□□ 1.725e-12■■□□□ 12.1
NKRFO15226 RTKN-209ENST00000484453 820 ntTSL 1 (best)25.51■■□□□ 1.675e-12■■□□□ 12.1
NKRFO15226 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.94■■□□□ 1.15e-12■■□□□ 12.1
NKRFO15226 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.785e-12■■□□□ 12.1
NKRFO15226 RTKN-208ENST00000479256 564 ntTSL 518.27■□□□□ 0.525e-12■■□□□ 12.1
NKRFO15226 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.325e-12■■□□□ 12.1
NKRFO15226 RTKN-207ENST00000472518 1105 ntTSL 1 (best)16.4■□□□□ 0.225e-12■■□□□ 12.1
NKRFO15226 CTDSP1-203ENST00000431127 586 ntTSL 320■□□□□ 0.798e-13■■□□□ 12.1
NKRFO15226 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.48e-7■■□□□ 12.1
NKRFO15226 NDRG1-204ENST00000517599 2918 ntTSL 213.56□□□□□ -0.248e-7■■□□□ 12.1
NKRFO15226 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC12.41□□□□□ -0.428e-7■■□□□ 12.1
NKRFO15226 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.468e-7■■□□□ 12.1
NKRFO15226 USP22-209ENST00000579645 1906 ntTSL 521.56■■□□□ 1.043e-6■■□□□ 12.1
NKRFO15226 USP22-204ENST00000476111 573 ntTSL 321.52■■□□□ 1.043e-6■■□□□ 12.1
NKRFO15226 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.093e-6■■□□□ 12.1
NKRFO15226 USP22-211ENST00000584538 554 ntTSL 413.55□□□□□ -0.243e-6■■□□□ 12.1
NKRFO15226 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.253e-6■■□□□ 12.1
NKRFO15226 USP22-202ENST00000455117 677 ntTSL 511.9□□□□□ -0.53e-6■■□□□ 12.1
NKRFO15226 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC37.71■■■■□ 3.633e-6■■□□□ 12
NKRFO15226 SPON2-204ENST00000502483 571 ntTSL 428.64■■■□□ 2.183e-6■■□□□ 12
NKRFO15226 C8orf82-205ENST00000534680 1637 ntTSL 526.66■■□□□ 1.863e-6■■□□□ 12
NKRFO15226 SPON2-220ENST00000515004 571 ntTSL 425.84■■□□□ 1.733e-6■■□□□ 12
NKRFO15226 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.643e-6■■□□□ 12
NKRFO15226 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.22■■□□□ 1.633e-6■■□□□ 12
NKRFO15226 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.03■■□□□ 1.63e-6■■□□□ 12
NKRFO15226 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.533e-6■■□□□ 12
NKRFO15226 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.489e-7■■□□□ 12
NKRFO15226 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.26■■□□□ 1.473e-6■■□□□ 12
NKRFO15226 PPP1R37-204ENST00000540059 1719 ntTSL 224.1■■□□□ 1.453e-6■■□□□ 12
NKRFO15226 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.333e-6■■□□□ 12
NKRFO15226 HRAS-207ENST00000468682 749 ntTSL 322.6■■□□□ 1.213e-6■■□□□ 12
NKRFO15226 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.163e-6■■□□□ 12
NKRFO15226 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.093e-6■■□□□ 12
NKRFO15226 HRAS-211ENST00000493230 1114 ntTSL 1 (best)21.44■■□□□ 1.023e-6■■□□□ 12
NKRFO15226 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.893e-6■■□□□ 12
NKRFO15226 SLC12A7-205ENST00000514994 586 ntTSL 320.34■□□□□ 0.853e-6■■□□□ 12
NKRFO15226 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.743e-6■■□□□ 12
NKRFO15226 RPS15A-209ENST00000573554 606 ntTSL 1 (best)19.48■□□□□ 0.713e-6■■□□□ 12
NKRFO15226 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.683e-6■■□□□ 12
NKRFO15226 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.27■□□□□ 0.683e-6■■□□□ 12
NKRFO15226 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.683e-6■■□□□ 12
NKRFO15226 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.11■□□□□ 0.653e-6■■□□□ 12
NKRFO15226 CFLAR-211ENST00000439154 1310 ntTSL 1 (best)19■□□□□ 0.633e-6■■□□□ 12
NKRFO15226 RARA-209ENST00000579727 564 ntTSL 418.71■□□□□ 0.593e-6■■□□□ 12
NKRFO15226 PPP1R37-202ENST00000422370 5943 ntTSL 1 (best)18.22■□□□□ 0.513e-6■■□□□ 12
NKRFO15226 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.02■□□□□ 0.473e-6■■□□□ 12
NKRFO15226 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.69■□□□□ 0.423e-6■■□□□ 12
NKRFO15226 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.42■□□□□ 0.383e-6■■□□□ 12
NKRFO15226 C8orf82-203ENST00000527462 401 ntAPPRIS ALT2 TSL 317.1■□□□□ 0.333e-6■■□□□ 12
NKRFO15226 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.33e-6■■□□□ 12
NKRFO15226 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.45■□□□□ 0.223e-6■■□□□ 12
NKRFO15226 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.193e-6■■□□□ 12
NKRFO15226 TPT1-AS1-217ENST00000522859 769 ntTSL 215.82■□□□□ 0.123e-6■■□□□ 12
NKRFO15226 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.113e-6■■□□□ 12
NKRFO15226 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC15.29■□□□□ 0.043e-6■■□□□ 12
NKRFO15226 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.81□□□□□ -0.043e-6■■□□□ 12
NKRFO15226 WDR27-202ENST00000441385 683 ntTSL 314.61□□□□□ -0.073e-6■■□□□ 12
NKRFO15226 RARA-208ENST00000577646 733 ntTSL 514.17□□□□□ -0.143e-6■■□□□ 12
NKRFO15226 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.183e-6■■□□□ 12
NKRFO15226 WDR27-211ENST00000546525 3511 ntTSL 1 (best)13.68□□□□□ -0.223e-6■■□□□ 12
NKRFO15226 RPS15A-206ENST00000569083 1022 ntTSL 2 BASIC12.92□□□□□ -0.343e-6■■□□□ 12
NKRFO15226 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.353e-6■■□□□ 12
NKRFO15226 CFLAR-202ENST00000340870 963 ntTSL 5 BASIC12.4□□□□□ -0.423e-6■■□□□ 12
NKRFO15226 CFLAR-222ENST00000474842 1091 ntTSL 1 (best)12.4□□□□□ -0.423e-6■■□□□ 12
NKRFO15226 SAMD4B-213ENST00000610417 3664 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.483e-6■■□□□ 12
NKRFO15226 WDR27-205ENST00000467418 947 ntTSL 511.65□□□□□ -0.543e-6■■□□□ 12
NKRFO15226 SAMD4B-214ENST00000611159 3662 ntTSL 5 BASIC11.49□□□□□ -0.573e-6■■□□□ 12
NKRFO15226 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.583e-6■■□□□ 12
NKRFO15226 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.623e-6■■□□□ 12
NKRFO15226 CFLAR-215ENST00000457277 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.683e-6■■□□□ 12
NKRFO15226 VAPB-201ENST00000265619 3596 ntTSL 29.7□□□□□ -0.863e-6■■□□□ 12
NKRFO15226 VAPB-206ENST00000520497 937 ntTSL 29.49□□□□□ -0.893e-6■■□□□ 12
NKRFO15226 TPT1-AS1-212ENST00000520924 553 ntTSL 49.31□□□□□ -0.923e-6■■□□□ 12
NKRFO15226 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC9.29□□□□□ -0.923e-6■■□□□ 12
NKRFO15226 RPS15A-208ENST00000572008 797 ntTSL 58.27□□□□□ -1.093e-6■■□□□ 12
NKRFO15226 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.13e-6■■□□□ 12
NKRFO15226 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC8.05□□□□□ -1.123e-6■■□□□ 12
NKRFO15226 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.82□□□□□ -1.163e-6■■□□□ 12
NKRFO15226 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.163e-6■■□□□ 12
NKRFO15226 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.183e-6■■□□□ 12
NKRFO15226 CFLAR-220ENST00000470178 516 ntTSL 26.56□□□□□ -1.363e-6■■□□□ 12
NKRFO15226 RPS15A-212ENST00000576008 589 ntTSL 1 (best)5.97□□□□□ -1.453e-6■■□□□ 12
NKRFO15226 RPS15A-202ENST00000562935 427 ntTSL 25.93□□□□□ -1.463e-6■■□□□ 12
NKRFO15226 CFLAR-217ENST00000461422 717 ntTSL 25.81□□□□□ -1.483e-6■■□□□ 12
NKRFO15226 RPS15A-207ENST00000569365 481 ntTSL 35.32□□□□□ -1.563e-6■■□□□ 12
NKRFO15226 CFLAR-219ENST00000462763 588 ntTSL 24.69□□□□□ -1.663e-6■■□□□ 12
NKRFO15226 RPS15A-210ENST00000574723 418 ntTSL 34.2□□□□□ -1.743e-6■■□□□ 12
NKRFO15226 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.381e-6■■□□□ 12
NKRFO15226 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.141e-6■■□□□ 12
NKRFO15226 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.851e-6■■□□□ 12
NKRFO15226 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.21e-6■■□□□ 12
Retrieved 100 of 9,198 protein–RNA pairs in 172.3 ms