Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.72■□□□□ 0.59
SMAD9O15198 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.72■□□□□ 0.59
SMAD9O15198 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD9O15198 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.71■□□□□ 0.59
SMAD9O15198 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.71■□□□□ 0.59
SMAD9O15198 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMAD9O15198 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SMAD9O15198 AC004911.1-201ENST00000416316 871 ntBASIC18.71■□□□□ 0.59
SMAD9O15198 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SMAD9O15198 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.71■□□□□ 0.59
SMAD9O15198 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.71■□□□□ 0.59
SMAD9O15198 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SMAD9O15198 MFSD11-216ENST00000590393 1141 ntBASIC18.71■□□□□ 0.59
SMAD9O15198 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SMAD9O15198 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SMAD9O15198 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD9O15198 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
SMAD9O15198 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
SMAD9O15198 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.7■□□□□ 0.58
SMAD9O15198 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SMAD9O15198 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.7■□□□□ 0.58
SMAD9O15198 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.7■□□□□ 0.58
SMAD9O15198 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMAD9O15198 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.7■□□□□ 0.58
SMAD9O15198 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.7■□□□□ 0.58
SMAD9O15198 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.7■□□□□ 0.58
SMAD9O15198 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.7■□□□□ 0.58
SMAD9O15198 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SMAD9O15198 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.7■□□□□ 0.58
SMAD9O15198 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.7■□□□□ 0.58
SMAD9O15198 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.7■□□□□ 0.58
SMAD9O15198 BID-214ENST00000617586 542 ntTSL 5 BASIC18.7■□□□□ 0.58
SMAD9O15198 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.7■□□□□ 0.58
SMAD9O15198 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD9O15198 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD9O15198 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMAD9O15198 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD9O15198 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.69■□□□□ 0.58
SMAD9O15198 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD9O15198 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMAD9O15198 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SMAD9O15198 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.69■□□□□ 0.58
SMAD9O15198 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD9O15198 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD9O15198 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMAD9O15198 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD9O15198 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.69■□□□□ 0.58
SMAD9O15198 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.69■□□□□ 0.58
SMAD9O15198 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD9O15198 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD9O15198 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
SMAD9O15198 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD9O15198 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD9O15198 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.68■□□□□ 0.58
SMAD9O15198 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD9O15198 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD9O15198 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD9O15198 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.68■□□□□ 0.58
SMAD9O15198 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SMAD9O15198 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.68■□□□□ 0.58
SMAD9O15198 AC011767.1-201ENST00000617410 1153 ntBASIC18.68■□□□□ 0.58
SMAD9O15198 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD9O15198 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD9O15198 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMAD9O15198 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.67■□□□□ 0.58
SMAD9O15198 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms