Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.6■□□□□ 0.73
UPK1AO00322 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1AO00322 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UPK1AO00322 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.6■□□□□ 0.73
UPK1AO00322 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1AO00322 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.6■□□□□ 0.73
UPK1AO00322 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
UPK1AO00322 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.6■□□□□ 0.73
UPK1AO00322 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1AO00322 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.6■□□□□ 0.73
UPK1AO00322 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
UPK1AO00322 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.6■□□□□ 0.73
UPK1AO00322 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.6■□□□□ 0.73
UPK1AO00322 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1AO00322 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
UPK1AO00322 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1AO00322 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1AO00322 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UPK1AO00322 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.6■□□□□ 0.73
UPK1AO00322 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
UPK1AO00322 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.59■□□□□ 0.73
UPK1AO00322 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
UPK1AO00322 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.59■□□□□ 0.73
UPK1AO00322 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.59■□□□□ 0.73
UPK1AO00322 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.59■□□□□ 0.73
UPK1AO00322 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 KRT18P14-201ENST00000534205 1250 ntBASIC19.59■□□□□ 0.73
UPK1AO00322 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.59■□□□□ 0.73
UPK1AO00322 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
UPK1AO00322 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UPK1AO00322 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.59■□□□□ 0.73
UPK1AO00322 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPK1AO00322 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
UPK1AO00322 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
UPK1AO00322 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
UPK1AO00322 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UPK1AO00322 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPK1AO00322 AC061975.6-201ENST00000579045 1553 ntBASIC19.58■□□□□ 0.73
UPK1AO00322 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.58■□□□□ 0.73
UPK1AO00322 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPK1AO00322 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UPK1AO00322 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPK1AO00322 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPK1AO00322 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UPK1AO00322 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
UPK1AO00322 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.58■□□□□ 0.73
UPK1AO00322 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.58■□□□□ 0.72
UPK1AO00322 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.58■□□□□ 0.72
UPK1AO00322 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.58■□□□□ 0.72
UPK1AO00322 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.58■□□□□ 0.72
UPK1AO00322 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.58■□□□□ 0.72
UPK1AO00322 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
UPK1AO00322 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
UPK1AO00322 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPK1AO00322 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
UPK1AO00322 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPK1AO00322 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UPK1AO00322 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UPK1AO00322 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1AO00322 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1AO00322 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1AO00322 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1AO00322 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.57■□□□□ 0.72
UPK1AO00322 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1AO00322 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1AO00322 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.57■□□□□ 0.72
UPK1AO00322 AC138907.5-202ENST00000569484 235 ntBASIC19.57■□□□□ 0.72
UPK1AO00322 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1AO00322 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UPK1AO00322 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UPK1AO00322 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.56■□□□□ 0.72
UPK1AO00322 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
UPK1AO00322 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPK1AO00322 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.56■□□□□ 0.72
UPK1AO00322 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
UPK1AO00322 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.56■□□□□ 0.72
UPK1AO00322 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.56■□□□□ 0.72
UPK1AO00322 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPK1AO00322 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UPK1AO00322 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UPK1AO00322 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms