Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.62■□□□□ 0.73
PDLIM1O00151 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PDLIM1O00151 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PDLIM1O00151 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
PDLIM1O00151 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
PDLIM1O00151 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PDLIM1O00151 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PDLIM1O00151 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PDLIM1O00151 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.61■□□□□ 0.73
PDLIM1O00151 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.61■□□□□ 0.73
PDLIM1O00151 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.61■□□□□ 0.73
PDLIM1O00151 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.61■□□□□ 0.73
PDLIM1O00151 pRNA.6-201ENST00000610482 90 ntBASIC19.61■□□□□ 0.73
PDLIM1O00151 pRNA.5-201ENST00000612139 90 ntBASIC19.61■□□□□ 0.73
PDLIM1O00151 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.61■□□□□ 0.73
PDLIM1O00151 pRNA.11-201ENST00000618423 90 ntBASIC19.61■□□□□ 0.73
PDLIM1O00151 pRNA.13-201ENST00000619112 90 ntBASIC19.61■□□□□ 0.73
PDLIM1O00151 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 SMG8-203ENST00000578922 2178 ntBASIC19.61■□□□□ 0.73
PDLIM1O00151 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
PDLIM1O00151 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PDLIM1O00151 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM1O00151 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM1O00151 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDLIM1O00151 AC020916.1-201ENST00000587762 1774 ntBASIC19.6■□□□□ 0.73
PDLIM1O00151 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM1O00151 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PDLIM1O00151 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.6■□□□□ 0.73
PDLIM1O00151 AC136469.2-201ENST00000623944 1028 ntBASIC19.6■□□□□ 0.73
PDLIM1O00151 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.6■□□□□ 0.73
PDLIM1O00151 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PDLIM1O00151 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM1O00151 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM1O00151 AC005082.1-201ENST00000413042 2259 ntBASIC19.6■□□□□ 0.73
PDLIM1O00151 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.6■□□□□ 0.73
PDLIM1O00151 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM1O00151 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM1O00151 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM1O00151 AC027702.1-201ENST00000563810 1770 ntBASIC19.6■□□□□ 0.73
PDLIM1O00151 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PDLIM1O00151 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PDLIM1O00151 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDLIM1O00151 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PDLIM1O00151 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
PDLIM1O00151 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.59■□□□□ 0.73
PDLIM1O00151 AL031432.3-201ENST00000607698 485 ntBASIC19.59■□□□□ 0.73
PDLIM1O00151 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM1O00151 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.59■□□□□ 0.73
PDLIM1O00151 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM1O00151 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM1O00151 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM1O00151 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.58■□□□□ 0.73
PDLIM1O00151 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.58■□□□□ 0.73
PDLIM1O00151 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.58■□□□□ 0.73
PDLIM1O00151 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM1O00151 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM1O00151 MIR4767-201ENST00000582827 78 ntBASIC19.58■□□□□ 0.72
PDLIM1O00151 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PDLIM1O00151 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
PDLIM1O00151 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM1O00151 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM1O00151 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM1O00151 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM1O00151 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM1O00151 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM1O00151 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PDLIM1O00151 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM1O00151 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM1O00151 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM1O00151 AC003102.1-202ENST00000563394 1796 ntBASIC19.57■□□□□ 0.72
PDLIM1O00151 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.57■□□□□ 0.72
PDLIM1O00151 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM1O00151 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.57■□□□□ 0.72
PDLIM1O00151 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM1O00151 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms