Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC007322.3-201ENST00000426526 701 ntBASIC23.31■■□□□ 1.32
DDX39AO00148 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX39AO00148 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX39AO00148 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
DDX39AO00148 AC079834.2-201ENST00000609776 1949 ntBASIC23.31■■□□□ 1.32
DDX39AO00148 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.31■■□□□ 1.32
DDX39AO00148 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX39AO00148 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
DDX39AO00148 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX39AO00148 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX39AO00148 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
DDX39AO00148 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX39AO00148 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
DDX39AO00148 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX39AO00148 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX39AO00148 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.3■■□□□ 1.32
DDX39AO00148 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.3■■□□□ 1.32
DDX39AO00148 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.3■■□□□ 1.32
DDX39AO00148 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX39AO00148 FAM21FP-204ENST00000608637 956 ntBASIC23.3■■□□□ 1.32
DDX39AO00148 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX39AO00148 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX39AO00148 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
DDX39AO00148 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX39AO00148 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX39AO00148 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
DDX39AO00148 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX39AO00148 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
DDX39AO00148 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX39AO00148 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
DDX39AO00148 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX39AO00148 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX39AO00148 AC069152.1-201ENST00000438030 544 ntBASIC23.29■■□□□ 1.32
DDX39AO00148 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.29■■□□□ 1.32
DDX39AO00148 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.29■■□□□ 1.32
DDX39AO00148 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.29■■□□□ 1.32
DDX39AO00148 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.29■■□□□ 1.32
DDX39AO00148 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX39AO00148 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
DDX39AO00148 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.29■■□□□ 1.32
DDX39AO00148 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX39AO00148 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX39AO00148 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.29■■□□□ 1.32
DDX39AO00148 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX39AO00148 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX39AO00148 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX39AO00148 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX39AO00148 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
DDX39AO00148 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX39AO00148 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.28■■□□□ 1.32
DDX39AO00148 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX39AO00148 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX39AO00148 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX39AO00148 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
DDX39AO00148 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX39AO00148 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX39AO00148 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX39AO00148 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX39AO00148 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX39AO00148 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX39AO00148 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.27■■□□□ 1.32
DDX39AO00148 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.27■■□□□ 1.32
DDX39AO00148 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
DDX39AO00148 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX39AO00148 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX39AO00148 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX39AO00148 AF106564.1-201ENST00000607058 2553 ntBASIC23.27■■□□□ 1.32
DDX39AO00148 AC116050.2-201ENST00000612102 1779 ntBASIC23.27■■□□□ 1.32
DDX39AO00148 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
DDX39AO00148 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX39AO00148 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.26■■□□□ 1.31
DDX39AO00148 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.26■■□□□ 1.31
DDX39AO00148 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
DDX39AO00148 AC133041.1-202ENST00000642053 222 ntBASIC23.26■■□□□ 1.31
DDX39AO00148 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
DDX39AO00148 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX39AO00148 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX39AO00148 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
DDX39AO00148 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX39AO00148 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
DDX39AO00148 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
DDX39AO00148 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX39AO00148 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX39AO00148 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.25■■□□□ 1.31
DDX39AO00148 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX39AO00148 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.25■■□□□ 1.31
DDX39AO00148 MIR4758-201ENST00000577688 71 ntBASIC23.25■■□□□ 1.31
DDX39AO00148 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.25■■□□□ 1.31
DDX39AO00148 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX39AO00148 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms