Protein–RNA interactions for Protein: B4E1H0

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HB4E1H0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SUPT3HB4E1H0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SUPT3HB4E1H0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 SLC25A24-204ENST00000569674 2357 ntBASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 LINC02228-203ENST00000641970 1355 ntBASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SUPT3HB4E1H0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 AC138907.5-202ENST00000569484 235 ntBASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 AC073314.1-201ENST00000568729 2216 ntBASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.3■□□□□ 0.84
SUPT3HB4E1H0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 AC007225.1-201ENST00000566331 1836 ntBASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SUPT3HB4E1H0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 AP005212.1-201ENST00000581547 1997 ntBASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SUPT3HB4E1H0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SUPT3HB4E1H0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.27■□□□□ 0.84
SUPT3HB4E1H0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.27■□□□□ 0.84
SUPT3HB4E1H0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HB4E1H0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.27■□□□□ 0.84
SUPT3HB4E1H0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HB4E1H0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SUPT3HB4E1H0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SUPT3HB4E1H0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms