Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRBV6-1A0A0K0K1D8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
TRBV6-1A0A0K0K1D8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PCDHAC2-203ENST00000615316 3011 ntBASIC15.46■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV6-1A0A0K0K1D8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV6-1A0A0K0K1D8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV6-1A0A0K0K1D8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AC133561.4-201ENST00000566112 224 ntBASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-1A0A0K0K1D8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-1A0A0K0K1D8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AL512631.2-201ENST00000604634 923 ntBASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRBV6-1A0A0K0K1D8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 RNF165-205ENST00000588679 2904 ntBASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AP004607.4-201ENST00000530158 1459 ntBASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms