Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 AC073314.1-201ENST00000568729 2216 ntBASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV21A0A0B4J279 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 AC092667.1-201ENST00000434301 2586 ntBASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 BX005040.4-201ENST00000637145 1518 ntBASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 AC007225.1-201ENST00000566331 1836 ntBASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV21A0A0B4J279 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 AC027682.1-201ENST00000562846 899 ntBASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 AC008764.7-201ENST00000593779 1081 ntBASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV21A0A0B4J279 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
TRAV21A0A0B4J279 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV21A0A0B4J279 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 TSPY26P-201ENST00000476365 1326 ntBASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV21A0A0B4J279 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms