Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC003957.1-201ENST00000625108 2673 ntBASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV5-3A0A0A0MS03 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 AF213884.3-201ENST00000563833 479 ntBASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 RARRES2P11-201ENST00000635158 484 ntBASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV5-3A0A0A0MS03 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 AL355001.2-201ENST00000620617 1191 ntBASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV5-3A0A0A0MS03 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 AC091305.1-201ENST00000479476 895 ntBASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 AL136967.2-201ENST00000623968 743 ntBASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV5-3A0A0A0MS03 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV5-3A0A0A0MS03 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV5-3A0A0A0MS03 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV5-3A0A0A0MS03 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 POU5F1P4-201ENST00000413175 1085 ntBASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 AC131212.1-201ENST00000613771 668 ntBASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 AC110285.6-201ENST00000617652 491 ntBASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV5-3A0A0A0MS03 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV5-3A0A0A0MS03 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 AC092720.2-201ENST00000602388 1665 ntBASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms