Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LPCAT2BP-201ENST00000420263 1534 ntBASIC9□□□□□ -0.97
SNX18Q96RF0 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 TADA2A-205ENST00000615182 4253 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
SNX18Q96RF0 CHORDC1-202ENST00000457199 2003 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
SNX18Q96RF0 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC9□□□□□ -0.97
SNX18Q96RF0 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 SPP1-211ENST00000614857 1558 ntTSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 MAGEB17-202ENST00000400004 1434 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 RPS13-201ENST00000228140 491 ntTSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 LCN2-201ENST00000277480 822 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 OR10H3-201ENST00000305892 951 ntAPPRIS P1 BASIC9□□□□□ -0.97
SNX18Q96RF0 COA4-201ENST00000355693 960 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 LLPH-202ENST00000446587 1177 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
SNX18Q96RF0 IGKV1D-27-201ENST00000453184 335 ntBASIC9□□□□□ -0.97
SNX18Q96RF0 AL390763.1-201ENST00000454492 346 ntTSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 RN7SL380P-201ENST00000461702 308 ntBASIC9□□□□□ -0.97
SNX18Q96RF0 RPL3P3-201ENST00000467870 1213 ntBASIC9□□□□□ -0.97
SNX18Q96RF0 AP001024.1-201ENST00000474540 345 ntBASIC9□□□□□ -0.97
SNX18Q96RF0 AC084121.2-201ENST00000528788 264 ntBASIC9□□□□□ -0.97
SNX18Q96RF0 COMMD9-206ENST00000532705 881 ntTSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 FAM181A-AS1-204ENST00000556290 526 ntTSL 4 BASIC9□□□□□ -0.97
SNX18Q96RF0 AC087516.2-203ENST00000558875 601 ntTSL 3 BASIC9□□□□□ -0.97
SNX18Q96RF0 AC111152.2-201ENST00000561392 485 ntTSL 3 BASIC9□□□□□ -0.97
SNX18Q96RF0 C1orf186-203ENST00000582070 1145 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 AC005954.2-201ENST00000586503 556 ntTSL 5 BASIC9□□□□□ -0.97
SNX18Q96RF0 LINC00969-229ENST00000596584 863 ntTSL 5 BASIC9□□□□□ -0.97
SNX18Q96RF0 TMCC1-AS1-202ENST00000604747 413 ntTSL 5 BASIC9□□□□□ -0.97
SNX18Q96RF0 AL356299.2-201ENST00000609218 586 ntTSL 4 BASIC9□□□□□ -0.97
SNX18Q96RF0 CKLF-CMTM1-205ENST00000615332 395 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 CCL4L2-219ENST00000620732 856 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 OR10H3-202ENST00000641646 1029 ntAPPRIS P1 BASIC9□□□□□ -0.97
SNX18Q96RF0 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 RTL1-201ENST00000534062 4193 ntAPPRIS P1 BASIC9□□□□□ -0.97
SNX18Q96RF0 BX005214.3-201ENST00000615174 1988 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 AL353770.3-201ENST00000616253 1988 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 CAMK2D-208ENST00000508738 1470 ntTSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 TBCCD1-205ENST00000446782 2186 ntTSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC9□□□□□ -0.97
SNX18Q96RF0 EDNRB-201ENST00000334286 4277 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
SNX18Q96RF0 BTN3A1-202ENST00000289361 3434 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 CLUHP4-201ENST00000507604 1343 ntBASIC9□□□□□ -0.97
SNX18Q96RF0 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 C1QTNF7-205ENST00000444304 1533 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SNX18Q96RF0 PAK3-212ENST00000519681 2638 ntTSL 5 BASIC9□□□□□ -0.97
SNX18Q96RF0 BTN3A3-202ENST00000361232 2294 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
SNX18Q96RF0 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 FPGT-201ENST00000370894 1380 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 CASC19-229ENST00000641418 1373 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 HAUS6P1-201ENST00000421150 1551 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 CATSPER2P1-204ENST00000439564 1579 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 FCGR2B-201ENST00000236937 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 SSX2-201ENST00000336777 1410 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 SSX2B-203ENST00000612490 1410 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 FAM111B-204ENST00000529618 2364 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC002451.2-201ENST00000624998 2398 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 PRRG3-201ENST00000370353 5977 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 MAJIN-201ENST00000301896 843 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 HBG2-202ENST00000380252 694 ntTSL 3 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 DEFA1-202ENST00000382692 485 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 SNORA48B-201ENST00000390912 135 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 RPS19P1-201ENST00000415286 434 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 CHCHD2P5-201ENST00000421414 400 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 AL831784.1-201ENST00000427302 373 ntTSL 2 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 APCDD1L-AS1-205ENST00000439558 648 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AL031597.1-201ENST00000447383 432 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 RPL18AP2-201ENST00000450007 482 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 ST6GALNAC2P1-201ENST00000451049 836 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 ZRANB2-AS2-205ENST00000455406 783 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 LMCD1-AS1-207ENST00000458666 581 ntTSL 4 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AL132671.2-201ENST00000467125 930 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC024940.2-201ENST00000495623 606 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 PTPN20-222ENST00000509774 788 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 PRR7-AS1-203ENST00000511565 502 ntTSL 3 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 PTPN20-226ENST00000513156 913 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC079226.1-201ENST00000513255 444 ntTSL 3 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 OR8B10P-201ENST00000529692 932 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC022762.1-201ENST00000529961 816 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC025575.2-201ENST00000549357 565 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC100791.2-201ENST00000570512 607 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC134978.1-201ENST00000579480 788 ntTSL 3 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 PITPNC1-204ENST00000581322 1124 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC117569.1-202ENST00000581532 557 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 RN7SL262P-201ENST00000584590 294 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC005394.1-201ENST00000589999 1269 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms