Protein–RNA interactions for Protein: Q9Y5I2

PCDHA10, Protocadherin alpha-10, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA10Q9Y5I2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 AC098934.4-201ENST00000564127 592 ntBASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA10Q9Y5I2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA10Q9Y5I2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA10Q9Y5I2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA10Q9Y5I2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA10Q9Y5I2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA10Q9Y5I2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHA10Q9Y5I2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDHA10Q9Y5I2 AC079834.2-201ENST00000609776 1949 ntBASIC23.14■■□□□ 1.3
PCDHA10Q9Y5I2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.14■■□□□ 1.29
PCDHA10Q9Y5I2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 LINC00565-201ENST00000562710 2331 ntBASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 MCRIP2P1-201ENST00000394346 511 ntBASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 AL355472.2-201ENST00000422958 438 ntBASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 CYP2T3P-201ENST00000601990 817 ntBASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA10Q9Y5I2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHA10Q9Y5I2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms