Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 AL359736.2-201ENST00000621992 437 ntBASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 AC116050.2-201ENST00000612102 1779 ntBASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB7Q9Y5E2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB7Q9Y5E2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB7Q9Y5E2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB7Q9Y5E2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
PCDHB7Q9Y5E2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB7Q9Y5E2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHB7Q9Y5E2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
PCDHB7Q9Y5E2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHB7Q9Y5E2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PCDHB7Q9Y5E2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHB7Q9Y5E2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB7Q9Y5E2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
PCDHB7Q9Y5E2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHB7Q9Y5E2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 FAM197Y4-202ENST00000622692 608 ntBASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHB7Q9Y5E2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 AC008550.1-201ENST00000511500 884 ntBASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PCDHB7Q9Y5E2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 AC105020.6-201ENST00000621523 1217 ntBASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHB7Q9Y5E2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 RPPH1-201ENST00000516869 333 ntBASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 C1QBPP2-201ENST00000528754 825 ntBASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHB7Q9Y5E2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHB7Q9Y5E2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms