Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
AP4S1Q9Y587 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP4S1Q9Y587 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.58■□□□□ 0.72
AP4S1Q9Y587 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.58■□□□□ 0.72
AP4S1Q9Y587 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.58■□□□□ 0.72
AP4S1Q9Y587 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 AL031848.2-201ENST00000607670 837 ntBASIC19.57■□□□□ 0.72
AP4S1Q9Y587 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 KRT8P33-201ENST00000508125 1423 ntBASIC19.57■□□□□ 0.72
AP4S1Q9Y587 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4S1Q9Y587 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 pRNA.6-201ENST00000610482 90 ntBASIC19.56■□□□□ 0.72
AP4S1Q9Y587 pRNA.5-201ENST00000612139 90 ntBASIC19.56■□□□□ 0.72
AP4S1Q9Y587 pRNA.11-201ENST00000618423 90 ntBASIC19.56■□□□□ 0.72
AP4S1Q9Y587 pRNA.13-201ENST00000619112 90 ntBASIC19.56■□□□□ 0.72
AP4S1Q9Y587 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 FP700111.2-201ENST00000619190 1892 ntBASIC19.56■□□□□ 0.72
AP4S1Q9Y587 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4S1Q9Y587 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4S1Q9Y587 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 MTDHP2-201ENST00000601468 714 ntBASIC19.54■□□□□ 0.72
AP4S1Q9Y587 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4S1Q9Y587 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP4S1Q9Y587 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP4S1Q9Y587 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP4S1Q9Y587 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.53■□□□□ 0.72
AP4S1Q9Y587 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP4S1Q9Y587 AC116562.4-201ENST00000641316 2276 ntBASIC19.53■□□□□ 0.72
AP4S1Q9Y587 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
AP4S1Q9Y587 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AP4S1Q9Y587 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms