Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 AL162377.1-201ENST00000618844 1793 ntBASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 AL512408.1-201ENST00000569378 2000 ntBASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2D4Q9Y2X8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 GUSBP5-201ENST00000418136 578 ntBASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 AC009237.3-201ENST00000393279 1427 ntBASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2D4Q9Y2X8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 AC112907.3-201ENST00000577781 2400 ntBASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.38□□□□□ -0.11
UBE2D4Q9Y2X8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms