Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AL355472.2-201ENST00000422958 438 ntBASIC28.5■■■□□ 2.15
NINLQ9Y2I6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC28.5■■■□□ 2.15
NINLQ9Y2I6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC28.5■■■□□ 2.15
NINLQ9Y2I6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 RNA5SP413-201ENST00000516373 109 ntBASIC28.49■■■□□ 2.15
NINLQ9Y2I6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
NINLQ9Y2I6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
NINLQ9Y2I6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NINLQ9Y2I6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NINLQ9Y2I6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
NINLQ9Y2I6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
NINLQ9Y2I6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
NINLQ9Y2I6 POU5F1P3-201ENST00000428824 1078 ntBASIC28.48■■■□□ 2.15
NINLQ9Y2I6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC28.48■■■□□ 2.15
NINLQ9Y2I6 AC244015.2-201ENST00000616358 1861 ntBASIC28.48■■■□□ 2.15
NINLQ9Y2I6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
NINLQ9Y2I6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
NINLQ9Y2I6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC28.47■■■□□ 2.15
NINLQ9Y2I6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC28.47■■■□□ 2.15
NINLQ9Y2I6 AC105020.6-201ENST00000621523 1217 ntBASIC28.47■■■□□ 2.15
NINLQ9Y2I6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC28.47■■■□□ 2.15
NINLQ9Y2I6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC28.46■■■□□ 2.15
NINLQ9Y2I6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC28.45■■■□□ 2.15
NINLQ9Y2I6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 AC087633.2-202ENST00000565166 1439 ntBASIC28.45■■■□□ 2.14
NINLQ9Y2I6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 OR2A1-AS1-201ENST00000462305 773 ntBASIC28.45■■■□□ 2.14
NINLQ9Y2I6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
NINLQ9Y2I6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
NINLQ9Y2I6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 KRT18P68-201ENST00000392293 1000 ntBASIC28.43■■■□□ 2.14
NINLQ9Y2I6 KRT18P29-201ENST00000397031 1267 ntBASIC28.43■■■□□ 2.14
NINLQ9Y2I6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NINLQ9Y2I6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC28.42■■■□□ 2.14
NINLQ9Y2I6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms