Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 AC073111.5-205ENST00000641717 521 ntBASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 AC116050.2-201ENST00000612102 1779 ntBASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
PCDHA4Q9UN74 AC011484.1-201ENST00000377652 1995 ntBASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 PLK5-205ENST00000642079 1969 ntBASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 AC231657.2-201ENST00000624556 255 ntBASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA4Q9UN74 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 CDCA4P2-201ENST00000441182 718 ntBASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHA4Q9UN74 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHA4Q9UN74 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 AL591742.1-201ENST00000604433 565 ntBASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHA4Q9UN74 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA4Q9UN74 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 AC068338.2-201ENST00000563278 1430 ntBASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 AC007322.3-201ENST00000426526 701 ntBASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 AC007322.1-201ENST00000426983 750 ntBASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 AL162412.1-201ENST00000567129 965 ntBASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 RAP2CP1-201ENST00000605103 478 ntBASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms