Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC083906.2-201ENST00000511578 360 ntBASIC19.8■□□□□ 0.76
CCDC88CQ9P219 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC88CQ9P219 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 AL121832.2-201ENST00000610979 668 ntBASIC19.78■□□□□ 0.76
CCDC88CQ9P219 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 ABHD17AP1-201ENST00000358206 933 ntBASIC19.78■□□□□ 0.76
CCDC88CQ9P219 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 AC007322.4-201ENST00000509611 723 ntBASIC19.78■□□□□ 0.76
CCDC88CQ9P219 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 AC005181.1-201ENST00000604782 1256 ntBASIC19.78■□□□□ 0.76
CCDC88CQ9P219 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC88CQ9P219 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 RBM17P2-201ENST00000616397 1405 ntBASIC19.77■□□□□ 0.76
CCDC88CQ9P219 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 AC133552.2-202ENST00000575694 574 ntBASIC19.77■□□□□ 0.76
CCDC88CQ9P219 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC88CQ9P219 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC88CQ9P219 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC88CQ9P219 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 AC069152.1-201ENST00000438030 544 ntBASIC19.76■□□□□ 0.75
CCDC88CQ9P219 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC88CQ9P219 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 MIR4651-201ENST00000582622 73 ntBASIC19.75■□□□□ 0.75
CCDC88CQ9P219 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC88CQ9P219 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms