Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC245052.3-201ENST00000450182 901 ntBASIC20.93■□□□□ 0.94
HACD3Q9P035 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.93■□□□□ 0.94
HACD3Q9P035 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.93■□□□□ 0.94
HACD3Q9P035 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HACD3Q9P035 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.93■□□□□ 0.94
HACD3Q9P035 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.93■□□□□ 0.94
HACD3Q9P035 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HACD3Q9P035 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HACD3Q9P035 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HACD3Q9P035 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HACD3Q9P035 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HACD3Q9P035 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.92■□□□□ 0.94
HACD3Q9P035 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HACD3Q9P035 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.92■□□□□ 0.94
HACD3Q9P035 AC137761.2-201ENST00000561729 223 ntBASIC20.92■□□□□ 0.94
HACD3Q9P035 AC145350.3-201ENST00000569033 163 ntBASIC20.92■□□□□ 0.94
HACD3Q9P035 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HACD3Q9P035 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HACD3Q9P035 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HACD3Q9P035 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.91■□□□□ 0.94
HACD3Q9P035 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.91■□□□□ 0.94
HACD3Q9P035 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.91■□□□□ 0.94
HACD3Q9P035 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HACD3Q9P035 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HACD3Q9P035 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.91■□□□□ 0.94
HACD3Q9P035 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.91■□□□□ 0.94
HACD3Q9P035 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.91■□□□□ 0.94
HACD3Q9P035 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.91■□□□□ 0.94
HACD3Q9P035 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.91■□□□□ 0.94
HACD3Q9P035 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.91■□□□□ 0.94
HACD3Q9P035 MYCNOS-205ENST00000641950 531 ntBASIC20.91■□□□□ 0.94
HACD3Q9P035 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HACD3Q9P035 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HACD3Q9P035 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HACD3Q9P035 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HACD3Q9P035 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.9■□□□□ 0.94
HACD3Q9P035 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HACD3Q9P035 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HACD3Q9P035 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HACD3Q9P035 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HACD3Q9P035 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.9■□□□□ 0.94
HACD3Q9P035 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HACD3Q9P035 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HACD3Q9P035 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HACD3Q9P035 UBE2DNL-204ENST00000602536 740 ntBASIC20.9■□□□□ 0.94
HACD3Q9P035 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
HACD3Q9P035 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.9■□□□□ 0.94
HACD3Q9P035 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HACD3Q9P035 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.9■□□□□ 0.94
HACD3Q9P035 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HACD3Q9P035 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HACD3Q9P035 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HACD3Q9P035 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
HACD3Q9P035 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.89■□□□□ 0.94
HACD3Q9P035 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.89■□□□□ 0.93
HACD3Q9P035 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
HACD3Q9P035 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.89■□□□□ 0.93
HACD3Q9P035 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.89■□□□□ 0.93
HACD3Q9P035 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HACD3Q9P035 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HACD3Q9P035 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.89■□□□□ 0.93
HACD3Q9P035 AC016769.1-201ENST00000409132 1010 ntBASIC20.89■□□□□ 0.93
HACD3Q9P035 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
HACD3Q9P035 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
HACD3Q9P035 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.89■□□□□ 0.93
HACD3Q9P035 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HACD3Q9P035 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HACD3Q9P035 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.89■□□□□ 0.93
HACD3Q9P035 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HACD3Q9P035 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.88■□□□□ 0.93
HACD3Q9P035 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HACD3Q9P035 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.88■□□□□ 0.93
HACD3Q9P035 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.88■□□□□ 0.93
HACD3Q9P035 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.88■□□□□ 0.93
HACD3Q9P035 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.88■□□□□ 0.93
HACD3Q9P035 AC243732.1-201ENST00000612648 864 ntBASIC20.88■□□□□ 0.93
HACD3Q9P035 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HACD3Q9P035 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HACD3Q9P035 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.88■□□□□ 0.93
HACD3Q9P035 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms