Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSU72Q9NP77 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SSU72Q9NP77 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSU72Q9NP77 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.59■□□□□ 0.89
SSU72Q9NP77 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.59■□□□□ 0.89
SSU72Q9NP77 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.58■□□□□ 0.89
SSU72Q9NP77 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SSU72Q9NP77 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SSU72Q9NP77 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.58■□□□□ 0.89
SSU72Q9NP77 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.58■□□□□ 0.89
SSU72Q9NP77 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.58■□□□□ 0.89
SSU72Q9NP77 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSU72Q9NP77 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.58■□□□□ 0.89
SSU72Q9NP77 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.58■□□□□ 0.89
SSU72Q9NP77 BX323043.1-201ENST00000641006 1765 ntBASIC20.58■□□□□ 0.89
SSU72Q9NP77 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SSU72Q9NP77 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SSU72Q9NP77 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.58■□□□□ 0.88
SSU72Q9NP77 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
SSU72Q9NP77 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSU72Q9NP77 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SSU72Q9NP77 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSU72Q9NP77 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
SSU72Q9NP77 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.57■□□□□ 0.88
SSU72Q9NP77 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.57■□□□□ 0.88
SSU72Q9NP77 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.57■□□□□ 0.88
SSU72Q9NP77 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.57■□□□□ 0.88
SSU72Q9NP77 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.57■□□□□ 0.88
SSU72Q9NP77 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.57■□□□□ 0.88
SSU72Q9NP77 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SSU72Q9NP77 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.57■□□□□ 0.88
SSU72Q9NP77 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSU72Q9NP77 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSU72Q9NP77 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSU72Q9NP77 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSU72Q9NP77 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSU72Q9NP77 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSU72Q9NP77 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSU72Q9NP77 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSU72Q9NP77 RNF165-205ENST00000588679 2904 ntBASIC20.56■□□□□ 0.88
SSU72Q9NP77 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.56■□□□□ 0.88
SSU72Q9NP77 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.56■□□□□ 0.88
SSU72Q9NP77 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSU72Q9NP77 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SSU72Q9NP77 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSU72Q9NP77 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.56■□□□□ 0.88
SSU72Q9NP77 AC092720.2-201ENST00000602388 1665 ntBASIC20.56■□□□□ 0.88
SSU72Q9NP77 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.56■□□□□ 0.88
SSU72Q9NP77 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSU72Q9NP77 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSU72Q9NP77 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSU72Q9NP77 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSU72Q9NP77 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSU72Q9NP77 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSU72Q9NP77 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSU72Q9NP77 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSU72Q9NP77 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSU72Q9NP77 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSU72Q9NP77 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSU72Q9NP77 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.55■□□□□ 0.88
SSU72Q9NP77 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SSU72Q9NP77 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SSU72Q9NP77 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSU72Q9NP77 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSU72Q9NP77 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSU72Q9NP77 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SSU72Q9NP77 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSU72Q9NP77 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.54■□□□□ 0.88
SSU72Q9NP77 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.54■□□□□ 0.88
SSU72Q9NP77 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSU72Q9NP77 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SSU72Q9NP77 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SSU72Q9NP77 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SSU72Q9NP77 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SSU72Q9NP77 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SSU72Q9NP77 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SSU72Q9NP77 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSU72Q9NP77 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.53■□□□□ 0.88
SSU72Q9NP77 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.53■□□□□ 0.88
SSU72Q9NP77 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms