Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
VCX3BQ9H321 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.74■□□□□ 0.75
VCX3BQ9H321 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.74■□□□□ 0.75
VCX3BQ9H321 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VCX3BQ9H321 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
VCX3BQ9H321 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCX3BQ9H321 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.74■□□□□ 0.75
VCX3BQ9H321 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 AC116562.4-201ENST00000641316 2276 ntBASIC19.73■□□□□ 0.75
VCX3BQ9H321 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 AC112907.3-201ENST00000577781 2400 ntBASIC19.73■□□□□ 0.75
VCX3BQ9H321 AL162377.1-201ENST00000618844 1793 ntBASIC19.73■□□□□ 0.75
VCX3BQ9H321 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCX3BQ9H321 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 TNXA-203ENST00000507684 2038 ntBASIC19.73■□□□□ 0.75
VCX3BQ9H321 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.73■□□□□ 0.75
VCX3BQ9H321 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
VCX3BQ9H321 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCX3BQ9H321 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCX3BQ9H321 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCX3BQ9H321 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
VCX3BQ9H321 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.71■□□□□ 0.75
VCX3BQ9H321 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VCX3BQ9H321 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
VCX3BQ9H321 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCX3BQ9H321 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCX3BQ9H321 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.71■□□□□ 0.75
VCX3BQ9H321 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCX3BQ9H321 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCX3BQ9H321 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 AC007225.1-201ENST00000566331 1836 ntBASIC19.7■□□□□ 0.74
VCX3BQ9H321 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.7■□□□□ 0.74
VCX3BQ9H321 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VCX3BQ9H321 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VCX3BQ9H321 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.7■□□□□ 0.74
VCX3BQ9H321 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.7■□□□□ 0.74
VCX3BQ9H321 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCX3BQ9H321 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCX3BQ9H321 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms