Protein–RNA interactions for Protein: Q99795

GPA33, Cell surface A33 antigen, humanhuman

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33Q99795 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.85■□□□□ 0.61
GPA33Q99795 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPA33Q99795 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.85■□□□□ 0.61
GPA33Q99795 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPA33Q99795 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.85■□□□□ 0.61
GPA33Q99795 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.85■□□□□ 0.61
GPA33Q99795 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GPA33Q99795 AL162377.1-201ENST00000618844 1793 ntBASIC18.85■□□□□ 0.61
GPA33Q99795 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GPA33Q99795 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPA33Q99795 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
GPA33Q99795 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
GPA33Q99795 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GPA33Q99795 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPA33Q99795 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPA33Q99795 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.84■□□□□ 0.61
GPA33Q99795 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPA33Q99795 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.84■□□□□ 0.61
GPA33Q99795 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.84■□□□□ 0.61
GPA33Q99795 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPA33Q99795 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.84■□□□□ 0.61
GPA33Q99795 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.84■□□□□ 0.61
GPA33Q99795 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GPA33Q99795 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GPA33Q99795 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPA33Q99795 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPA33Q99795 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GPA33Q99795 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GPA33Q99795 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.84■□□□□ 0.61
GPA33Q99795 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.84■□□□□ 0.61
GPA33Q99795 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.83■□□□□ 0.61
GPA33Q99795 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.83■□□□□ 0.61
GPA33Q99795 AL121603.2-201ENST00000557373 2117 ntBASIC18.83■□□□□ 0.61
GPA33Q99795 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPA33Q99795 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPA33Q99795 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GPA33Q99795 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
GPA33Q99795 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
GPA33Q99795 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GPA33Q99795 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.83■□□□□ 0.6
GPA33Q99795 AC053503.5-201ENST00000601508 636 ntBASIC18.83■□□□□ 0.6
GPA33Q99795 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPA33Q99795 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
GPA33Q99795 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GPA33Q99795 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.83■□□□□ 0.6
GPA33Q99795 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GPA33Q99795 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GPA33Q99795 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.82■□□□□ 0.6
GPA33Q99795 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPA33Q99795 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPA33Q99795 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPA33Q99795 EDA-201ENST00000338901 1233 ntBASIC18.82■□□□□ 0.6
GPA33Q99795 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPA33Q99795 MIR939-201ENST00000401314 82 ntBASIC18.82■□□□□ 0.6
GPA33Q99795 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.82■□□□□ 0.6
GPA33Q99795 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.82■□□□□ 0.6
GPA33Q99795 AF213884.3-201ENST00000563833 479 ntBASIC18.82■□□□□ 0.6
GPA33Q99795 AL031432.3-201ENST00000607698 485 ntBASIC18.82■□□□□ 0.6
GPA33Q99795 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPA33Q99795 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GPA33Q99795 AC011484.1-201ENST00000377652 1995 ntBASIC18.82■□□□□ 0.6
GPA33Q99795 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GPA33Q99795 RASA4CP-201ENST00000424092 1398 ntBASIC18.81■□□□□ 0.6
GPA33Q99795 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.81■□□□□ 0.6
GPA33Q99795 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.81■□□□□ 0.6
GPA33Q99795 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.81■□□□□ 0.6
GPA33Q99795 AC110285.6-201ENST00000617652 491 ntBASIC18.81■□□□□ 0.6
GPA33Q99795 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GPA33Q99795 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GPA33Q99795 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.81■□□□□ 0.6
GPA33Q99795 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPA33Q99795 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPA33Q99795 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPA33Q99795 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GPA33Q99795 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPA33Q99795 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.8■□□□□ 0.6
GPA33Q99795 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.8■□□□□ 0.6
GPA33Q99795 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.8■□□□□ 0.6
GPA33Q99795 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.8■□□□□ 0.6
GPA33Q99795 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GPA33Q99795 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPA33Q99795 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.8■□□□□ 0.6
GPA33Q99795 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPA33Q99795 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPA33Q99795 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPA33Q99795 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GPA33Q99795 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.8■□□□□ 0.6
GPA33Q99795 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.8■□□□□ 0.6
GPA33Q99795 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPA33Q99795 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.8■□□□□ 0.6
GPA33Q99795 AC012414.1-201ENST00000556676 535 ntBASIC18.8■□□□□ 0.6
GPA33Q99795 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.8■□□□□ 0.6
GPA33Q99795 AC005837.3-201ENST00000612163 286 ntBASIC18.8■□□□□ 0.6
GPA33Q99795 AL355001.2-201ENST00000620617 1191 ntBASIC18.8■□□□□ 0.6
GPA33Q99795 AL136967.2-201ENST00000623968 743 ntBASIC18.8■□□□□ 0.6
GPA33Q99795 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GPA33Q99795 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPA33Q99795 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GPA33Q99795 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
GPA33Q99795 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms