Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX18Q96RF0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX18Q96RF0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SNX18Q96RF0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX18Q96RF0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX18Q96RF0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX18Q96RF0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX18Q96RF0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX18Q96RF0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SNX18Q96RF0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX18Q96RF0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX18Q96RF0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
SNX18Q96RF0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNX18Q96RF0 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX18Q96RF0 AC105233.4-201ENST00000642045 216 ntBASIC18.8■□□□□ 0.6
SNX18Q96RF0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX18Q96RF0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX18Q96RF0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX18Q96RF0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX18Q96RF0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX18Q96RF0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX18Q96RF0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX18Q96RF0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNX18Q96RF0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNX18Q96RF0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX18Q96RF0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX18Q96RF0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX18Q96RF0 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.79■□□□□ 0.6
SNX18Q96RF0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX18Q96RF0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 AC092666.2-201ENST00000613287 246 ntBASIC18.79■□□□□ 0.6
SNX18Q96RF0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX18Q96RF0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 AC005224.4-201ENST00000583262 1652 ntBASIC18.79■□□□□ 0.6
SNX18Q96RF0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX18Q96RF0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX18Q96RF0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 TSPY26P-201ENST00000476365 1326 ntBASIC18.78■□□□□ 0.6
SNX18Q96RF0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX18Q96RF0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX18Q96RF0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 MIR572-201ENST00000384983 95 ntBASIC18.78■□□□□ 0.6
SNX18Q96RF0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX18Q96RF0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX18Q96RF0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX18Q96RF0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX18Q96RF0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX18Q96RF0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.78■□□□□ 0.6
SNX18Q96RF0 LINC01006-201ENST00000333319 2292 ntBASIC18.77■□□□□ 0.6
SNX18Q96RF0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX18Q96RF0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX18Q96RF0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX18Q96RF0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX18Q96RF0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX18Q96RF0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SNX18Q96RF0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX18Q96RF0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
SNX18Q96RF0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX18Q96RF0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX18Q96RF0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 BX005040.4-201ENST00000637145 1518 ntBASIC18.76■□□□□ 0.59
SNX18Q96RF0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 IRS3P-201ENST00000223076 1006 ntBASIC18.76■□□□□ 0.59
SNX18Q96RF0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms