Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR663A-201ENST00000385250 93 ntBASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 CROCCP5-201ENST00000436658 830 ntBASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 AC006970.2-201ENST00000450065 779 ntBASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 AC005181.1-201ENST00000604782 1256 ntBASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD1Q96NR3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 AC007322.4-201ENST00000509611 723 ntBASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.54■□□□□ 0.72
PTCHD1Q96NR3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.53■□□□□ 0.72
PTCHD1Q96NR3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 AC068338.2-201ENST00000563278 1430 ntBASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD1Q96NR3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTCHD1Q96NR3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
PTCHD1Q96NR3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTCHD1Q96NR3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PTCHD1Q96NR3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTCHD1Q96NR3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
PTCHD1Q96NR3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 AL591742.1-201ENST00000604433 565 ntBASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD1Q96NR3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCHD1Q96NR3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PTCHD1Q96NR3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.49■□□□□ 0.71
PTCHD1Q96NR3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms