Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TUBGCP3Q96CW5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBGCP3Q96CW5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.1■□□□□ 0.81
TUBGCP3Q96CW5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TUBGCP3Q96CW5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TUBGCP3Q96CW5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TUBGCP3Q96CW5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.1■□□□□ 0.81
TUBGCP3Q96CW5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 AC007225.1-201ENST00000566331 1836 ntBASIC20.09■□□□□ 0.81
TUBGCP3Q96CW5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 BX005040.4-201ENST00000637145 1518 ntBASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.08■□□□□ 0.81
TUBGCP3Q96CW5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TUBGCP3Q96CW5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TUBGCP3Q96CW5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TUBGCP3Q96CW5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TUBGCP3Q96CW5 AC027702.1-201ENST00000563810 1770 ntBASIC20.08■□□□□ 0.8
TUBGCP3Q96CW5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TUBGCP3Q96CW5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TUBGCP3Q96CW5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 AC027682.1-201ENST00000562846 899 ntBASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 AC131212.1-201ENST00000613771 668 ntBASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 AL391422.3-201ENST00000603791 2761 ntBASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBGCP3Q96CW5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBGCP3Q96CW5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBGCP3Q96CW5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms