Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.16■■□□□ 1.14
SHC3Q92529 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SHC3Q92529 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.16■■□□□ 1.14
SHC3Q92529 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SHC3Q92529 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.16■■□□□ 1.14
SHC3Q92529 RARRES2P6-201ENST00000567333 442 ntBASIC22.16■■□□□ 1.14
SHC3Q92529 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.16■■□□□ 1.14
SHC3Q92529 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SHC3Q92529 AC243732.1-201ENST00000612648 864 ntBASIC22.16■■□□□ 1.14
SHC3Q92529 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.16■■□□□ 1.14
SHC3Q92529 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SHC3Q92529 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SHC3Q92529 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.16■■□□□ 1.14
SHC3Q92529 RBM17P2-201ENST00000616397 1405 ntBASIC22.15■■□□□ 1.14
SHC3Q92529 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHC3Q92529 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SHC3Q92529 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SHC3Q92529 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.15■■□□□ 1.14
SHC3Q92529 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.15■■□□□ 1.14
SHC3Q92529 UBE2DNL-204ENST00000602536 740 ntBASIC22.15■■□□□ 1.14
SHC3Q92529 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHC3Q92529 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.15■■□□□ 1.14
SHC3Q92529 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.15■■□□□ 1.14
SHC3Q92529 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHC3Q92529 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.14
SHC3Q92529 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
SHC3Q92529 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SHC3Q92529 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
SHC3Q92529 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.14■■□□□ 1.13
SHC3Q92529 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.14■■□□□ 1.13
SHC3Q92529 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.14■■□□□ 1.13
SHC3Q92529 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SHC3Q92529 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.14■■□□□ 1.13
SHC3Q92529 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHC3Q92529 FEM1AP1-201ENST00000431297 1995 ntBASIC22.14■■□□□ 1.13
SHC3Q92529 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SHC3Q92529 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 KRT18P5-201ENST00000436075 1291 ntBASIC22.13■■□□□ 1.13
SHC3Q92529 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.13■■□□□ 1.13
SHC3Q92529 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.13■■□□□ 1.13
SHC3Q92529 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.13■■□□□ 1.13
SHC3Q92529 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.13■■□□□ 1.13
SHC3Q92529 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SHC3Q92529 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHC3Q92529 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SHC3Q92529 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.12■■□□□ 1.13
SHC3Q92529 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHC3Q92529 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHC3Q92529 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHC3Q92529 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.12■■□□□ 1.13
SHC3Q92529 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SHC3Q92529 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.12■■□□□ 1.13
SHC3Q92529 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.12■■□□□ 1.13
SHC3Q92529 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.12■■□□□ 1.13
SHC3Q92529 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.12■■□□□ 1.13
SHC3Q92529 AC007225.1-201ENST00000566331 1836 ntBASIC22.12■■□□□ 1.13
SHC3Q92529 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHC3Q92529 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHC3Q92529 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.11■■□□□ 1.13
SHC3Q92529 AC091799.1-201ENST00000422823 811 ntBASIC22.11■■□□□ 1.13
SHC3Q92529 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.11■■□□□ 1.13
SHC3Q92529 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHC3Q92529 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.11■■□□□ 1.13
SHC3Q92529 MYCNOS-205ENST00000641950 531 ntBASIC22.11■■□□□ 1.13
SHC3Q92529 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.11■■□□□ 1.13
SHC3Q92529 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SHC3Q92529 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SHC3Q92529 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.11■■□□□ 1.13
SHC3Q92529 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.1■■□□□ 1.13
SHC3Q92529 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHC3Q92529 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHC3Q92529 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
SHC3Q92529 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.1■■□□□ 1.13
SHC3Q92529 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.1■■□□□ 1.13
SHC3Q92529 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.1■■□□□ 1.13
SHC3Q92529 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SHC3Q92529 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.1■■□□□ 1.13
SHC3Q92529 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHC3Q92529 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SHC3Q92529 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SHC3Q92529 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.1■■□□□ 1.13
SHC3Q92529 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
SHC3Q92529 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHC3Q92529 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.09■■□□□ 1.13
SHC3Q92529 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHC3Q92529 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHC3Q92529 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.09■■□□□ 1.13
SHC3Q92529 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SHC3Q92529 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SHC3Q92529 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms