Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC233263.1-201ENST00000578059 224 ntBASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
RAPGEF4Q8WZA2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RAPGEF4Q8WZA2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RAPGEF4Q8WZA2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC27.34■■□□□ 1.97
RAPGEF4Q8WZA2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC27.34■■□□□ 1.97
RAPGEF4Q8WZA2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC27.34■■□□□ 1.97
RAPGEF4Q8WZA2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RAPGEF4Q8WZA2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RAPGEF4Q8WZA2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
RAPGEF4Q8WZA2 MIR718-201ENST00000390190 70 ntBASIC27.33■■□□□ 1.97
RAPGEF4Q8WZA2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RAPGEF4Q8WZA2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC27.33■■□□□ 1.97
RAPGEF4Q8WZA2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC27.33■■□□□ 1.97
RAPGEF4Q8WZA2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC27.33■■□□□ 1.97
RAPGEF4Q8WZA2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RAPGEF4Q8WZA2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
RAPGEF4Q8WZA2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
RAPGEF4Q8WZA2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 AC116050.2-201ENST00000612102 1779 ntBASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 AC069544.1-201ENST00000609399 999 ntBASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF4Q8WZA2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC27.31■■□□□ 1.96
RAPGEF4Q8WZA2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF4Q8WZA2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.29■■□□□ 1.96
RAPGEF4Q8WZA2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC27.28■■□□□ 1.96
RAPGEF4Q8WZA2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms