Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RNF152P1-201ENST00000397754 604 ntBASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 HTR7P1-201ENST00000538670 1336 ntBASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 PMS2P1-201ENST00000431037 1228 ntBASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 AC245100.3-201ENST00000441281 285 ntBASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 AC106795.1-205ENST00000512851 1056 ntBASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 NUDT16P1-203ENST00000513809 620 ntBASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC8.56□□□□□ -1.04
SYNE2Q8WXH0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 YBX1P2-201ENST00000489612 999 ntBASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 FAAHP1-202ENST00000446499 1238 ntBASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 AC110285.5-201ENST00000611501 352 ntBASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 IGHV3-22-201ENST00000520721 359 ntBASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 COX10-202ENST00000429152 875 ntTSL 2 BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SYNE2Q8WXH0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 AC112497.1-201ENST00000624824 639 ntBASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 BX842568.4-201ENST00000421222 227 ntBASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 AC111152.3-201ENST00000569699 673 ntBASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms