Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MBD3L1Q8WWY6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 AC004408.2-201ENST00000623613 2777 ntBASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 Z92544.1-202ENST00000571933 1220 ntBASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 AC087239.1-201ENST00000622671 572 ntBASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MBD3L1Q8WWY6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 AP004607.7-201ENST00000527152 1677 ntBASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.24■□□□□ 0.19
MBD3L1Q8WWY6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 AL451085.2-201ENST00000605085 799 ntBASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 AC133637.1-201ENST00000624115 1537 ntBASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
MBD3L1Q8WWY6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms