Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 KRT18P68-201ENST00000392293 1000 ntBASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 AC006058.3-201ENST00000606217 1069 ntBASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TMEM40Q8WWA1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 AC026366.1-201ENST00000488803 879 ntBASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TMEM40Q8WWA1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 AC128676.1-201ENST00000454392 318 ntBASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 AC093827.2-201ENST00000512654 315 ntBASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 AC116050.2-201ENST00000612102 1779 ntBASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TMEM40Q8WWA1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TMEM40Q8WWA1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
TMEM40Q8WWA1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TMEM40Q8WWA1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.64■■□□□ 1.22
TMEM40Q8WWA1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM40Q8WWA1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM40Q8WWA1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
TMEM40Q8WWA1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM40Q8WWA1 AP003097.1-201ENST00000530657 1135 ntBASIC22.64■■□□□ 1.21
TMEM40Q8WWA1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
TMEM40Q8WWA1 AC008403.3-201ENST00000598924 454 ntBASIC22.64■■□□□ 1.21
TMEM40Q8WWA1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
TMEM40Q8WWA1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEM40Q8WWA1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEM40Q8WWA1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 GCSHP5-201ENST00000443090 522 ntBASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 AC060766.5-201ENST00000590539 871 ntBASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 HLA-B-256ENST00000639848 1089 ntBASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEM40Q8WWA1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.61■■□□□ 1.21
TMEM40Q8WWA1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms