Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC091799.1-201ENST00000422823 811 ntBASIC22.3■■□□□ 1.16
LMO3Q8TAP4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
LMO3Q8TAP4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.29■■□□□ 1.16
LMO3Q8TAP4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 MYCNOS-205ENST00000641950 531 ntBASIC22.28■■□□□ 1.16
LMO3Q8TAP4 AC007225.1-201ENST00000566331 1836 ntBASIC22.28■■□□□ 1.16
LMO3Q8TAP4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.28■■□□□ 1.16
LMO3Q8TAP4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.27■■□□□ 1.16
LMO3Q8TAP4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LMO3Q8TAP4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
LMO3Q8TAP4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LMO3Q8TAP4 AC073314.1-201ENST00000568729 2216 ntBASIC22.25■■□□□ 1.15
LMO3Q8TAP4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 AL162430.1-201ENST00000480705 870 ntBASIC22.24■■□□□ 1.15
LMO3Q8TAP4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms