Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SETD9Q8NE22 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SETD9Q8NE22 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SETD9Q8NE22 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SETD9Q8NE22 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SETD9Q8NE22 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SETD9Q8NE22 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.01■□□□□ 0.63
SETD9Q8NE22 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.01■□□□□ 0.63
SETD9Q8NE22 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.01■□□□□ 0.63
SETD9Q8NE22 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SETD9Q8NE22 AL117332.1-201ENST00000622628 974 ntBASIC19.01■□□□□ 0.63
SETD9Q8NE22 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.01■□□□□ 0.63
SETD9Q8NE22 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SETD9Q8NE22 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SETD9Q8NE22 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SETD9Q8NE22 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.01■□□□□ 0.63
SETD9Q8NE22 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SETD9Q8NE22 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SETD9Q8NE22 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19■□□□□ 0.63
SETD9Q8NE22 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19■□□□□ 0.63
SETD9Q8NE22 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SETD9Q8NE22 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19■□□□□ 0.63
SETD9Q8NE22 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SETD9Q8NE22 KRT8P33-201ENST00000508125 1423 ntBASIC19■□□□□ 0.63
SETD9Q8NE22 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SETD9Q8NE22 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SETD9Q8NE22 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SETD9Q8NE22 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SETD9Q8NE22 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SETD9Q8NE22 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.99■□□□□ 0.63
SETD9Q8NE22 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SETD9Q8NE22 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.99■□□□□ 0.63
SETD9Q8NE22 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SETD9Q8NE22 AP006587.3-201ENST00000525742 1516 ntBASIC18.99■□□□□ 0.63
SETD9Q8NE22 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SETD9Q8NE22 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.99■□□□□ 0.63
SETD9Q8NE22 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.99■□□□□ 0.63
SETD9Q8NE22 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SETD9Q8NE22 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SETD9Q8NE22 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SETD9Q8NE22 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SETD9Q8NE22 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SETD9Q8NE22 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.98■□□□□ 0.63
SETD9Q8NE22 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SETD9Q8NE22 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SETD9Q8NE22 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SETD9Q8NE22 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SETD9Q8NE22 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
SETD9Q8NE22 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.98■□□□□ 0.63
SETD9Q8NE22 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SETD9Q8NE22 FP700111.2-201ENST00000619190 1892 ntBASIC18.98■□□□□ 0.63
SETD9Q8NE22 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SETD9Q8NE22 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SETD9Q8NE22 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.97■□□□□ 0.63
SETD9Q8NE22 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.97■□□□□ 0.63
SETD9Q8NE22 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.97■□□□□ 0.63
SETD9Q8NE22 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.97■□□□□ 0.63
SETD9Q8NE22 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SETD9Q8NE22 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SETD9Q8NE22 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SETD9Q8NE22 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SETD9Q8NE22 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
SETD9Q8NE22 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SETD9Q8NE22 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SETD9Q8NE22 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SETD9Q8NE22 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
SETD9Q8NE22 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SETD9Q8NE22 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.96■□□□□ 0.63
SETD9Q8NE22 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SETD9Q8NE22 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SETD9Q8NE22 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.96■□□□□ 0.63
SETD9Q8NE22 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.96■□□□□ 0.63
SETD9Q8NE22 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SETD9Q8NE22 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.96■□□□□ 0.63
SETD9Q8NE22 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.96■□□□□ 0.63
SETD9Q8NE22 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.96■□□□□ 0.63
SETD9Q8NE22 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.96■□□□□ 0.63
SETD9Q8NE22 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms