Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.22■□□□□ 0.83
CPSF7Q8N684 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CPSF7Q8N684 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.22■□□□□ 0.83
CPSF7Q8N684 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF7Q8N684 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CPSF7Q8N684 AC121338.2-201ENST00000622535 1744 ntBASIC20.22■□□□□ 0.83
CPSF7Q8N684 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 AC020907.5-201ENST00000624372 1936 ntBASIC20.21■□□□□ 0.83
CPSF7Q8N684 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF7Q8N684 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF7Q8N684 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF7Q8N684 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF7Q8N684 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF7Q8N684 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 AL162430.1-201ENST00000480705 870 ntBASIC20.21■□□□□ 0.83
CPSF7Q8N684 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF7Q8N684 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF7Q8N684 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF7Q8N684 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF7Q8N684 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.21■□□□□ 0.83
CPSF7Q8N684 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 AC007225.1-201ENST00000566331 1836 ntBASIC20.2■□□□□ 0.82
CPSF7Q8N684 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CPSF7Q8N684 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF7Q8N684 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.19■□□□□ 0.82
CPSF7Q8N684 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF7Q8N684 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.19■□□□□ 0.82
CPSF7Q8N684 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF7Q8N684 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CPSF7Q8N684 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.19■□□□□ 0.82
CPSF7Q8N684 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.19■□□□□ 0.82
CPSF7Q8N684 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.19■□□□□ 0.82
CPSF7Q8N684 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF7Q8N684 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.19■□□□□ 0.82
CPSF7Q8N684 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.19■□□□□ 0.82
CPSF7Q8N684 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.19■□□□□ 0.82
CPSF7Q8N684 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
CPSF7Q8N684 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.18■□□□□ 0.82
CPSF7Q8N684 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF7Q8N684 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF7Q8N684 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CPSF7Q8N684 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF7Q8N684 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.18■□□□□ 0.82
CPSF7Q8N684 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.18■□□□□ 0.82
CPSF7Q8N684 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF7Q8N684 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.18■□□□□ 0.82
CPSF7Q8N684 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF7Q8N684 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.18■□□□□ 0.82
CPSF7Q8N684 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CPSF7Q8N684 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF7Q8N684 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF7Q8N684 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.18■□□□□ 0.82
CPSF7Q8N684 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF7Q8N684 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF7Q8N684 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.17■□□□□ 0.82
CPSF7Q8N684 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CPSF7Q8N684 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CPSF7Q8N684 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF7Q8N684 AL162377.1-201ENST00000618844 1793 ntBASIC20.17■□□□□ 0.82
CPSF7Q8N684 MIR572-201ENST00000384983 95 ntBASIC20.17■□□□□ 0.82
CPSF7Q8N684 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF7Q8N684 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF7Q8N684 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.17■□□□□ 0.82
CPSF7Q8N684 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF7Q8N684 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms