Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 BX005040.4-201ENST00000637145 1518 ntBASIC13.9□□□□□ -0.19
LINC01561Q8N1V8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.9□□□□□ -0.19
LINC01561Q8N1V8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.9□□□□□ -0.19
LINC01561Q8N1V8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LINC01561Q8N1V8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 AL162377.1-201ENST00000618844 1793 ntBASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 AP004607.4-201ENST00000530158 1459 ntBASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 AC053503.5-201ENST00000601508 636 ntBASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
LINC01561Q8N1V8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 AC126544.1-201ENST00000580842 1059 ntBASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LINC01561Q8N1V8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 AL356441.2-201ENST00000443009 864 ntBASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 EEF1DP3-203ENST00000566025 782 ntBASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC01561Q8N1V8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC01561Q8N1V8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms