Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 AC010141.2-201ENST00000452426 721 ntBASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 AP001160.3-201ENST00000601484 763 ntBASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC36Q8IYA8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC36Q8IYA8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.54
CCDC36Q8IYA8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC36Q8IYA8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC36Q8IYA8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 AC010542.4-201ENST00000563151 1910 ntBASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC36Q8IYA8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 AC026471.6-201ENST00000622954 1905 ntBASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC36Q8IYA8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 SLC7A5P1-201ENST00000568957 537 ntBASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC36Q8IYA8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC36Q8IYA8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms