Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CROCCP3Q8IVE0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CROCCP3Q8IVE0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.77■□□□□ 0.6
CROCCP3Q8IVE0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.77■□□□□ 0.6
CROCCP3Q8IVE0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CROCCP3Q8IVE0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.77■□□□□ 0.6
CROCCP3Q8IVE0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CROCCP3Q8IVE0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CROCCP3Q8IVE0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CROCCP3Q8IVE0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.76■□□□□ 0.59
CROCCP3Q8IVE0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 AC112907.3-201ENST00000577781 2400 ntBASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CROCCP3Q8IVE0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 AC020907.5-201ENST00000624372 1936 ntBASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CROCCP3Q8IVE0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 AC139795.1-202ENST00000500444 432 ntBASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 AC004687.1-201ENST00000579003 1625 ntBASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CROCCP3Q8IVE0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms