Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LYSMD2Q8IV50 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 AL158211.5-201ENST00000623583 2518 ntBASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
LYSMD2Q8IV50 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 MIR6722-201ENST00000617286 78 ntBASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD2Q8IV50 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 AC010980.1-201ENST00000587192 1142 ntBASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 AC125437.2-201ENST00000625180 2167 ntBASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.18■□□□□ 0.5
LYSMD2Q8IV50 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 TCF3P1-201ENST00000423021 1937 ntBASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD2Q8IV50 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 AC093503.3-201ENST00000624917 2352 ntBASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LYSMD2Q8IV50 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms