Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDPF1Q6NVV7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CDPF1Q6NVV7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.71■□□□□ 0.1
CDPF1Q6NVV7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDPF1Q6NVV7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
CDPF1Q6NVV7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDPF1Q6NVV7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDPF1Q6NVV7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDPF1Q6NVV7 AC019069.1-201ENST00000610008 1333 ntBASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 AC104581.1-202ENST00000635932 2618 ntBASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.7■□□□□ 0.1
CDPF1Q6NVV7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CDPF1Q6NVV7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDPF1Q6NVV7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 KRT18P24-201ENST00000344739 1156 ntBASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDPF1Q6NVV7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms