Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
EXOSC6Q5RKV6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 KRT18P5-201ENST00000436075 1291 ntBASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
EXOSC6Q5RKV6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 AC091799.1-201ENST00000422823 811 ntBASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 UBE2DNL-204ENST00000602536 740 ntBASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EXOSC6Q5RKV6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 MYCNOS-205ENST00000641950 531 ntBASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXOSC6Q5RKV6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EXOSC6Q5RKV6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC6Q5RKV6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC6Q5RKV6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC6Q5RKV6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.17■□□□□ 0.66
EXOSC6Q5RKV6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.17■□□□□ 0.66
EXOSC6Q5RKV6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.17■□□□□ 0.66
EXOSC6Q5RKV6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms