Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.57■□□□□ 0.72
RUNDC3AQ59EK9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RUNDC3AQ59EK9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 AC135279.3-201ENST00000610945 1311 ntBASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 AL512408.1-201ENST00000569378 2000 ntBASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 AC008764.7-201ENST00000593779 1081 ntBASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 AC011484.1-201ENST00000377652 1995 ntBASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.55■□□□□ 0.72
RUNDC3AQ59EK9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 TSPY26P-201ENST00000476365 1326 ntBASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 EEF1DP3-203ENST00000566025 782 ntBASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.54■□□□□ 0.72
RUNDC3AQ59EK9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 AC099791.1-201ENST00000416440 715 ntBASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 AC053503.5-201ENST00000601508 636 ntBASIC19.53■□□□□ 0.72
RUNDC3AQ59EK9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms