Protein–RNA interactions for Protein: Q3KR37

GRAMD1B, GRAM domain-containing protein 1B, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1BQ3KR37 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 BX842568.3-201ENST00000418104 571 ntBASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 AC104564.3-201ENST00000582367 638 ntBASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.08■□□□□ 0.81
GRAMD1BQ3KR37 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GRAMD1BQ3KR37 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GRAMD1BQ3KR37 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.08■□□□□ 0.8
GRAMD1BQ3KR37 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.08■□□□□ 0.8
GRAMD1BQ3KR37 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GRAMD1BQ3KR37 AL020996.1-203ENST00000536896 2307 ntBASIC20.08■□□□□ 0.8
GRAMD1BQ3KR37 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GRAMD1BQ3KR37 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 AC068587.7-201ENST00000641602 218 ntBASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1BQ3KR37 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 EDA-201ENST00000338901 1233 ntBASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 AC008764.7-201ENST00000593779 1081 ntBASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 AC233992.3-201ENST00000607491 485 ntBASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 AC026471.6-201ENST00000622954 1905 ntBASIC20.06■□□□□ 0.8
GRAMD1BQ3KR37 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 AP005212.1-201ENST00000581547 1997 ntBASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.05■□□□□ 0.8
GRAMD1BQ3KR37 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 AP001330.3-201ENST00000520123 633 ntBASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 AL031432.3-201ENST00000607698 485 ntBASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 AL355001.2-201ENST00000620617 1191 ntBASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GRAMD1BQ3KR37 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms