Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC30.08■■■□□ 2.41
SPHKAPQ2M3C7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SPHKAPQ2M3C7 GUSBP5-202ENST00000510805 1989 ntBASIC30.07■■■□□ 2.4
SPHKAPQ2M3C7 KRT18P68-201ENST00000392293 1000 ntBASIC30.07■■■□□ 2.4
SPHKAPQ2M3C7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SPHKAPQ2M3C7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SPHKAPQ2M3C7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC30.07■■■□□ 2.4
SPHKAPQ2M3C7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC30.07■■■□□ 2.4
SPHKAPQ2M3C7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC30.07■■■□□ 2.4
SPHKAPQ2M3C7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 HES2-205ENST00000487437 968 ntTSL 3 BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SPHKAPQ2M3C7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SPHKAPQ2M3C7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC30.04■■■□□ 2.4
SPHKAPQ2M3C7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
SPHKAPQ2M3C7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC30.04■■■□□ 2.4
SPHKAPQ2M3C7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC30.04■■■□□ 2.4
SPHKAPQ2M3C7 AL356652.1-201ENST00000615962 565 ntBASIC30.04■■■□□ 2.4
SPHKAPQ2M3C7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SPHKAPQ2M3C7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 AL596275.1-201ENST00000423464 877 ntBASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPHKAPQ2M3C7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 GOLGA2P6-201ENST00000340929 2049 ntBASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
SPHKAPQ2M3C7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SPHKAPQ2M3C7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SPHKAPQ2M3C7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 POM121L13P-201ENST00000422362 380 ntBASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 OR2A1-AS1-207ENST00000486094 819 ntBASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 AP006294.2-201ENST00000641667 209 ntBASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC30.01■■■□□ 2.39
SPHKAPQ2M3C7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SPHKAPQ2M3C7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SPHKAPQ2M3C7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SPHKAPQ2M3C7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC30■■■□□ 2.39
SPHKAPQ2M3C7 C1QBPP2-201ENST00000528754 825 ntBASIC30■■■□□ 2.39
SPHKAPQ2M3C7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
SPHKAPQ2M3C7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms