Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRAMEP78395 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PRAMEP78395 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.84■□□□□ 0.93
PRAMEP78395 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.84■□□□□ 0.93
PRAMEP78395 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRAMEP78395 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.84■□□□□ 0.93
PRAMEP78395 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.84■□□□□ 0.93
PRAMEP78395 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEP78395 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.83■□□□□ 0.93
PRAMEP78395 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEP78395 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.83■□□□□ 0.93
PRAMEP78395 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.83■□□□□ 0.93
PRAMEP78395 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEP78395 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEP78395 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PRAMEP78395 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
PRAMEP78395 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PRAMEP78395 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEP78395 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.83■□□□□ 0.93
PRAMEP78395 AP001160.3-201ENST00000601484 763 ntBASIC20.83■□□□□ 0.93
PRAMEP78395 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PRAMEP78395 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.83■□□□□ 0.92
PRAMEP78395 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEP78395 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEP78395 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
PRAMEP78395 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
PRAMEP78395 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEP78395 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
PRAMEP78395 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEP78395 KRT16P2-201ENST00000414673 1423 ntBASIC20.82■□□□□ 0.92
PRAMEP78395 AC004854.2-201ENST00000608450 1441 ntBASIC20.82■□□□□ 0.92
PRAMEP78395 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PRAMEP78395 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.82■□□□□ 0.92
PRAMEP78395 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.82■□□□□ 0.92
PRAMEP78395 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEP78395 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEP78395 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEP78395 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PRAMEP78395 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEP78395 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEP78395 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEP78395 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PRAMEP78395 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEP78395 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.81■□□□□ 0.92
PRAMEP78395 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.81■□□□□ 0.92
PRAMEP78395 AC121338.2-201ENST00000622535 1744 ntBASIC20.81■□□□□ 0.92
PRAMEP78395 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PRAMEP78395 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.8■□□□□ 0.92
PRAMEP78395 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PRAMEP78395 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.8■□□□□ 0.92
PRAMEP78395 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRAMEP78395 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.79■□□□□ 0.92
PRAMEP78395 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.79■□□□□ 0.92
PRAMEP78395 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PRAMEP78395 PLK5-205ENST00000642079 1969 ntBASIC20.79■□□□□ 0.92
PRAMEP78395 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRAMEP78395 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.79■□□□□ 0.92
PRAMEP78395 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PRAMEP78395 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRAMEP78395 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms