Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SIRPAP78324 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.87■□□□□ 0.61
SIRPAP78324 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.87■□□□□ 0.61
SIRPAP78324 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.86■□□□□ 0.61
SIRPAP78324 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.86■□□□□ 0.61
SIRPAP78324 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.86■□□□□ 0.61
SIRPAP78324 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.86■□□□□ 0.61
SIRPAP78324 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.86■□□□□ 0.61
SIRPAP78324 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SIRPAP78324 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIRPAP78324 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.85■□□□□ 0.61
SIRPAP78324 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
SIRPAP78324 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIRPAP78324 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIRPAP78324 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.85■□□□□ 0.61
SIRPAP78324 LINC01521-201ENST00000504184 1943 ntBASIC18.85■□□□□ 0.61
SIRPAP78324 CDCA4P2-201ENST00000441182 718 ntBASIC18.85■□□□□ 0.61
SIRPAP78324 AC010141.2-201ENST00000452426 721 ntBASIC18.85■□□□□ 0.61
SIRPAP78324 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.85■□□□□ 0.61
SIRPAP78324 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SIRPAP78324 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIRPAP78324 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIRPAP78324 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SIRPAP78324 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIRPAP78324 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SIRPAP78324 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.85■□□□□ 0.61
SIRPAP78324 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SIRPAP78324 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SIRPAP78324 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.84■□□□□ 0.61
SIRPAP78324 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SIRPAP78324 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.84■□□□□ 0.61
SIRPAP78324 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.84■□□□□ 0.61
SIRPAP78324 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.84■□□□□ 0.61
SIRPAP78324 AC138907.5-202ENST00000569484 235 ntBASIC18.84■□□□□ 0.61
SIRPAP78324 MFSD11-216ENST00000590393 1141 ntBASIC18.84■□□□□ 0.61
SIRPAP78324 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIRPAP78324 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SIRPAP78324 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.83■□□□□ 0.61
SIRPAP78324 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIRPAP78324 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIRPAP78324 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIRPAP78324 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPAP78324 AC026185.1-201ENST00000445748 174 ntBASIC18.83■□□□□ 0.6
SIRPAP78324 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SIRPAP78324 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPAP78324 MYCNOS-205ENST00000641950 531 ntBASIC18.83■□□□□ 0.6
SIRPAP78324 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.83■□□□□ 0.6
SIRPAP78324 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.83■□□□□ 0.6
SIRPAP78324 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPAP78324 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPAP78324 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPAP78324 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPAP78324 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIRPAP78324 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.83■□□□□ 0.6
SIRPAP78324 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SIRPAP78324 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.83■□□□□ 0.6
SIRPAP78324 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SIRPAP78324 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.82■□□□□ 0.6
SIRPAP78324 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.82■□□□□ 0.6
SIRPAP78324 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.82■□□□□ 0.6
SIRPAP78324 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.82■□□□□ 0.6
SIRPAP78324 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.82■□□□□ 0.6
SIRPAP78324 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.82■□□□□ 0.6
SIRPAP78324 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.82■□□□□ 0.6
SIRPAP78324 EEF1DP3-203ENST00000566025 782 ntBASIC18.82■□□□□ 0.6
SIRPAP78324 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SIRPAP78324 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SIRPAP78324 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIRPAP78324 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms